RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 D6RAR5 112 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 BET1O15155 118 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 TPPPO94811 219 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 TGM6O95932 706 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 AMY2AP04746 511 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 GIPP09681 153 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 VSIG10L2P0DP72 767 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 DLX5P56178 289 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 ZFP82Q8N141 532 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 EXD3Q8N9H8 876 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 SAP25Q8TEE9 199 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 TMEM41AQ96HV5 264 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 TSNAXQ99598 290 aaKnown RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 C7orf50Q9BRJ6 194 aaKnown RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 JAM3Q9BX67 310 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 CADP27708 2225 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 GABARAPH6UMI1 98 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 H7C2Y5 167 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 HCKP08631 526 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 QDPRP09417 244 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 MAPK3P27361 379 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 GUCA1AP43080 201 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-203ENST00000434376 GGTLC2Q14390 218 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 OR52N5Q8NH56 324 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 DDIT4LQ96D03 193 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 SLAMF6Q96DU3 332 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 TWSG1Q9GZX9 223 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 PRR13Q9NZ81 148 aa13.87□□□□□ -0.19
SCARF1-203ENST00000434376 IGLV1-36A0A0B4J1U3 117 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 TMEM200CA6NKL6 621 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 MPIG6BO95866 241 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 DBHP09172 617 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 VAMP1P23763 118 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 SLC25A1P53007 311 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 SNU13P55769 128 aaKnown RBP13.86□□□□□ -0.19
SCARF1-203ENST00000434376 MUC20Q8N307 709 aaPredicted RBP13.86□□□□□ -0.19
SCARF1-203ENST00000434376 STK35Q8TDR2 534 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 ASB5Q8WWX0 329 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 PLEKHA1Q9HB21 404 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
SCARF1-203ENST00000434376 PLEKHA6Q9Y2H5 1048 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 GABRA1P14867 456 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 TCN2P20062 427 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 LAP3P28838 519 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
SCARF1-203ENST00000434376 PDCD1Q15116 288 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 OR4D6Q8NGJ1 314 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 SLC6A7Q99884 636 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 SELENOIQ9C0D9 397 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 CHST11Q9NPF2 352 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 STEAP1Q9UHE8 339 aa13.86□□□□□ -0.19
SCARF1-203ENST00000434376 PRSS3P35030 304 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 CDNFQ49AH0 187 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF546Q86UE3 836 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF837Q96EG3 531 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 LDAHQ9H6V9 325 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 HHLA2Q9UM44 414 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 A0A1B0GTQ1 180 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 BLACEA4D250 179 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 HTR2CP28335 458 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 OLFML2AQ68BL7 652 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 WDR74Q6RFH5 385 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 LRRTM1Q86UE6 522 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 TMEM105Q8N8V8 129 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 CPNE2Q96FN4 548 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF75AQ96N20 296 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 OR51B6Q9H340 312 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ATG12O94817 140 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 GLI4P10075 376 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 GNB3P16520 340 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 CRABP1P29762 137 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 RASGEF1BQ0VAM2 473 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 HAGHLQ6PII5 290 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 SEZ6L2Q6UXD5 910 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 PXT1Q8NFP0 134 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 OR5L2Q8NGL0 311 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ROBO4Q8WZ75 1007 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ADAT3Q96EY9 351 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF385AQ96PM9 386 aaKnown RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 SLC6A15Q9H2J7 730 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 EXOSC3Q9NQT5 275 aaKnown RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 NPDC1Q9NQX5 325 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-203ENST00000434376 ASF1BQ9NVP2 202 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 OPN4Q9UHM6 478 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 DKKL1Q9UK85 242 aa13.85□□□□□ -0.19
SCARF1-203ENST00000434376 C9J4A7 227 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 GPR31O00270 319 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 CTAG2O75638 210 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 F12P00748 615 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF684Q5T5D7 378 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ASPHD2Q6ICH7 369 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ALKBH2Q6NS38 261 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 KCTD9Q7L273 389 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 BEST3Q8N1M1 668 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms