RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SLC16A13Q7RTY0 426 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 CALHM3Q86XJ0 350 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 NKAIN4Q8IVV8 208 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 WDFY1Q8IWB7 410 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 FAM71AQ8IYT1 594 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 CMTM1Q8IZ96 169 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 TMEM256Q8N2U0 113 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 NPWQ8N729 165 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 NECAP1Q8NC96 275 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 C19orf18Q8NEA5 215 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 BPIFCQ8NFQ6 507 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 OR4K5Q8NGD3 323 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 OR8U1Q8NH10 309 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 OR5B3Q8NH48 314 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 OR51E1Q8TCB6 317 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 ZNF721Q8TF20 911 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 RNF139Q8WU17 664 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 CAPSLQ8WWF8 208 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 HAUS1Q96CS2 278 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 ECHDC3Q96DC8 303 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 NRBF2Q96F24 287 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 OPALINQ96PE5 141 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 RNF5Q99942 180 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 C11orf70Q9BRQ4 267 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 GEMIN7Q9H840 131 aaKnown RBP1.22□□□□□ -2.21
CDC40-204ENST00000431461 C12orf10Q9HB07 376 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 TMEM27Q9HBJ8 222 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 TMEM9BQ9NQ34 198 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 ZC4H2Q9NQZ6 224 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 GCNT4Q9P109 453 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 RABL2BQ9UNT1 228 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 CAB39Q9Y376 341 aaPredicted RBP1.22□□□□□ -2.21
CDC40-204ENST00000431461 DOCK9Q9BZ29 2069 aa1.22□□□□□ -2.21
CDC40-204ENST00000431461 IGHV1-69DA0A0B4J2H0 117 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 TSPAN11A1L157 253 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 DNALI1O14645 258 aaPredicted RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 ZNF207O43670 478 aaKnown RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 PLIN3O60664 434 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 PTHP01270 115 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 DCNP07585 359 aaKnown RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 HSPD1P10809 573 aaKnown RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 BCKDHBP21953 392 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 GALP22466 123 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 ME2P23368 584 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 MPV17P39210 176 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 AP1S2P56377 157 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 TAS2R39P59534 338 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 RPS23P62266 143 aaKnown RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 IRX3P78415 501 aaPredicted RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 CDK5Q00535 292 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 SEMG2Q02383 582 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 RAD51Q06609 339 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 TGM3Q08188 693 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 DNAJC3Q13217 504 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 NAB1Q13506 487 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 PNOCQ13519 176 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 CUL2Q13617 745 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 LY6EQ16553 131 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 PRR9Q5T870 116 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 FAM222AQ5U5X8 452 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 CEMP1Q6PRD7 247 aaPredicted RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 SPINT4Q6UDR6 99 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 CASP12Q6UXS9 341 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 RTL4Q6ZR62 310 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 FAM43BQ6ZT52 329 aaPredicted RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 NT5DC3Q86UY8 548 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 MYOCDQ8IZQ8 938 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 SNX31Q8N9S9 440 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 BBOF1Q8ND07 529 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 OR52K2Q8NGK3 314 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 ENKURQ8TC29 256 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 LRRC29Q8WV35 223 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 RCN3Q96D15 328 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 ZNF2Q9BSG1 426 aaPredicted RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 MCUBQ9NWR8 336 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 MRPL22Q9NWU5 206 aaKnown RBP1.21□□□□□ -2.22
CDC40-204ENST00000431461 DCAF16Q9NXF7 216 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 SLC39A1Q9NY26 324 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 ZNF835Q9Y2P0 537 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 CBY1Q9Y3M2 126 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 JCADQ9P266 1359 aa1.21□□□□□ -2.22
CDC40-204ENST00000431461 GPATCH8Q9UKJ3 1502 aaKnown RBP1.2□□□□□ -2.22
CDC40-204ENST00000431461 IGHV3-49A0A0A0MS15 119 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 IGHV1-3A0A0C4DH29 117 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 RPL36A-HNRNPH2H7BZ11 118 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 HSBP1O75506 76 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 UPK1BO75841 260 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 FLOT1O75955 427 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 CYB5R3P00387 301 aaPredicted RBP1.2□□□□□ -2.22
CDC40-204ENST00000431461 IGHDP01880 384 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 OR8U9P0C7N5 309 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 UBE2E1P51965 193 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 TAS2R31P59538 309 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 YWHAEP62258 255 aaKnown RBP1.2□□□□□ -2.22
CDC40-204ENST00000431461 CDC20Q12834 499 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 SELENBP1Q13228 472 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 SOHLH1Q5JUK2 328 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 MFSD14CQ5VZR4 134 aa1.2□□□□□ -2.22
CDC40-204ENST00000431461 CD300LGQ6UXG3 332 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms