RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 RAB11BQ15907 218 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 GLYATL3Q5SZD4 288 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 RHOUQ7L0Q8 258 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 FNDC9Q8TBE3 224 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 HAS2Q92819 552 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 S100A16Q96FQ6 103 aaKnown RBP14.66□□□□□ -0.06
USHBP1-203ENST00000431146 ABCG5Q9H222 651 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 RBFOX1Q9NWB1 397 aaKnown RBP14.66□□□□□ -0.06
USHBP1-203ENST00000431146 NR4A2P43354 598 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 SLC6A9P48067 706 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 PITPNAQ00169 270 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 GPR176Q14439 515 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 CEACAM16Q2WEN9 425 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 SLC36A2Q495M3 483 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 JAGN1Q8N5M9 183 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 ZFP62Q8NB50 900 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-203ENST00000431146 FAM71F1Q96KD3 344 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-203ENST00000431146 CMTM3Q96MX0 182 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 PRRX2Q99811 253 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 NIPAL2Q9H841 368 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 GPR84Q9NQS5 396 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 PLEK2Q9NYT0 353 aa14.66□□□□□ -0.06
USHBP1-203ENST00000431146 MYEF2Q9P2K5 600 aaKnown RBP14.66□□□□□ -0.06
USHBP1-203ENST00000431146 MGAQ8IWI9 3026 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 A0A1B0GVI7 797 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 FAM240BA0A1B0GVZ2 78 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 SLC17A2O00624 439 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 ABOP16442 354 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 SOX8P57073 446 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 GRB2P62993 217 aaKnown RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MRPS34P82930 218 aaKnown RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 RSPO1Q2MKA7 263 aaPredicted RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 C2orf76Q3KRA6 126 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 TMEM69Q5SWH9 247 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MZT2BQ6NZ67 158 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 ASCL5Q7RTU5 278 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 BIVMQ86UB2 503 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MEIOBQ8N635 442 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 FAM3DQ96BQ1 224 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 HAVCR1Q96D42 359 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 GAL3ST1Q99999 423 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MRI1Q9BV20 369 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 TMA7Q9Y2S6 64 aaKnown RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 NOSIPQ9Y314 301 aaKnown RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 ETV7Q9Y603 341 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 PTH2RP49190 550 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 TNFSF10P50591 281 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 SLC10A1Q14973 349 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 DMRTC1Q5HYR2 192 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 FAM27BQ5VT28 67 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 GLT8D1Q68CQ7 371 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 TUSC5Q8IXB3 177 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 SCMH1Q96GD3 660 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 LDAHQ9H6V9 325 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 EXO5Q9H790 373 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MOB1AQ9H8S9 216 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 CALHM2Q9HA72 323 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 TMEM38BQ9NVV0 291 aa14.65□□□□□ -0.06
USHBP1-203ENST00000431146 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
USHBP1-203ENST00000431146 DOCK7Q96N67 2140 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 FAM157BP0CG42 384 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 SDHBP21912 280 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 HTR2CP28335 458 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 DDOSTP39656 456 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 DEFB109BQ30KR1 87 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 ELFN2Q5R3F8 820 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 TSPO2Q5TGU0 170 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 FAM166AQ6J272 317 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 OR13C9Q8NGT0 318 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 RAB40AQ8WXH6 277 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 SLC25A28Q96A46 364 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 PRRG4Q9BZD6 226 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 GPR35Q9HC97 309 aa14.64□□□□□ -0.07
USHBP1-203ENST00000431146 A0A0B4J293 547 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TMEM272A0A1B0GTI8 110 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TMEM127O75204 238 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 SYNGR4O95473 234 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TPTEP56180 551 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 HIST1H3AP68431 136 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 CLN3Q13286 438 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 HYAL4Q2M3T9 481 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 HIST2H3PS2Q5TEC6 136 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 C9orf135Q5VTT2 229 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 RSBN1Q5VWQ0 802 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-203ENST00000431146 IGF2-ASQ6U949 168 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 PLET1Q6UQ28 207 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 BAIAP2L2Q6UXY1 529 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 HIST2H3AQ71DI3 136 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 FAM109AQ8N4B1 249 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TOMM5Q8N4H5 51 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 OR52N4Q8NGI2 321 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 OR52I2Q8NH67 350 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 LILRB4Q8NHJ6 448 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 LILRB1Q8NHL6 650 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-203ENST00000431146 CPT1CQ8TCG5 803 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 SMIM4Q8WVI0 70 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 UPRTQ96BW1 309 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 PGAM5Q96HS1 289 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 FOXB1Q99853 325 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 RNF121Q9H920 327 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms