RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TMEM68Q96MH6 324 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 MESP1Q9BRJ9 268 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TMEM231Q9H6L2 316 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 MBD2Q9UBB5 411 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 MTFP1Q9UDX5 166 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SHPKQ9UHJ6 478 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 CYB5R1Q9UHQ9 305 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 CHTOPQ9Y3Y2 248 aaKnown RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 ETV7Q9Y603 341 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 FANCMQ8IYD8 2048 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 A0A1W2PNR3 127 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 C19orf67A6NJJ6 358 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 F5H5K5 113 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 CD38P28907 300 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 RPL35P42766 123 aaKnown RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 KIR3DL2P43630 455 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 PPICP45877 212 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 CLRN1P58418 232 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 Q5PR19 223 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 MANEAQ5SRI9 462 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 C8orf44Q96CB5 159 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SLC46A1Q96NT5 459 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 OR5B2Q96R09 309 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TRAF4Q9BUZ4 470 aaPredicted RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 CTSFQ9UBX1 484 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 OPN4Q9UHM6 478 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 OR52A1Q9UKL2 312 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 COL6A6A6NMZ7 2263 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 LINC00862A6NCI5 91 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 OR5H14A6NHG9 310 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 METTL12A8MUP2 240 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 ZNF749O43361 778 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 CRTAPO75718 401 aaPredicted RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 CDAP32320 146 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 CAPZBP47756 277 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 NPY4RP50391 375 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 EMP2P54851 167 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 MRPS21P82921 87 aaKnown RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 MC2RQ01718 297 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 EGR4Q05215 589 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 PAPD4Q6PIY7 484 aaKnown RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 DNM1P34Q6PK57 102 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 BATF2Q8N1L9 274 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 SCARB1Q8WTV0 552 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 PHYHIPQ92561 330 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 OR8B4Q96RC9 309 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 WDR77Q9BQA1 342 aaPredicted RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 PARP12Q9H0J9 701 aaKnown RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 HEXA-AS1Q9H8Q6 139 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 MLXQ9UH92 298 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 ICAM5Q9UMF0 924 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 PRRC2CQ9Y520 2896 aaKnown RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 SDCBPO00560 298 aaPredicted RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 TOR1AO14656 332 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 GSTZ1O43708 216 aaPredicted RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 GDF9O60383 454 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 WNT11O96014 354 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 HOXB5P09067 269 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 ICAM2P13598 275 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 UBE2IP63279 158 aaKnown RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 SKP2Q13309 424 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 MOGAT2Q3SYC2 334 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 CYB5R2Q6BCY4 276 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 PRSS42Q7Z5A4 293 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 ZNF615Q8N8J6 731 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 OR6N1Q8NGY5 312 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 STK35Q8TDR2 534 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 PRRX2Q99811 253 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 SMIM3Q9BZL3 60 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 FGF21Q9NSA1 209 aa7.23□□□□□ -1.25
HPS4-205ENST00000429411 KIF26AQ9ULI4 1882 aaPredicted RBP7.23□□□□□ -1.25
HPS4-205ENST00000429411 ZNF726A6NNF4 738 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 IGHV4-34P06331 123 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 POU2F2P09086 479 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 BCKDHBP21953 392 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 ABCD3P28288 659 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 CRABP1P29762 137 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 HRH1P35367 487 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 SLC6A8P48029 635 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 ZNF41P51814 821 aaPredicted RBP7.22□□□□□ -1.25
HPS4-205ENST00000429411 CEBPGP53567 150 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 AIMP2Q13155 320 aaKnown RBP7.22□□□□□ -1.25
HPS4-205ENST00000429411 ANKRD16Q6P6B7 361 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 TMEM81Q6P7N7 255 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 DBX2Q6ZNG2 339 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 FJX1Q86VR8 437 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 ANGPTL5Q86XS5 388 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 FAM71CQ8NEG0 241 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 OR51E1Q8TCB6 317 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 PTPMT1Q8WUK0 201 aaPredicted RBP7.22□□□□□ -1.25
HPS4-205ENST00000429411 PPP1R1CQ8WVI7 109 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 WNT2BQ93097 391 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 HGDQ93099 445 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 PPP4R1LQ9P1A2 415 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 MMP17Q9ULZ9 603 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 FRYQ5TBA9 3013 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 VSTM2BA6NLU5 285 aa7.22□□□□□ -1.25
HPS4-205ENST00000429411 SLC33A1O00400 549 aaPredicted RBP7.22□□□□□ -1.25
HPS4-205ENST00000429411 SLC17A2O00624 439 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms