RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 CDAP32320 146 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 CSNK1A1P48729 337 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 GSK3AP49840 483 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 MLF1P58340 268 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 LSM6P62312 80 aaKnown RBP12.13□□□□□ -0.47
THBS3-202ENST00000428962 DHODHQ02127 395 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 MEF2DQ14814 521 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 POU4F3Q15319 338 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 ZNF584Q8IVC4 421 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 MAML2Q8IZL2 1156 aaPredicted RBP12.13□□□□□ -0.47
THBS3-202ENST00000428962 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 OR51E1Q8TCB6 317 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
THBS3-202ENST00000428962 B3GNT4Q9C0J1 378 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
THBS3-202ENST00000428962 ZNF160Q9HCG1 818 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 GLTPQ9NZD2 209 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
THBS3-202ENST00000428962 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
THBS3-202ENST00000428962 NPIPA2E9PIF3 369 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 NPIPA3F8WFD2 350 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 ERVH48-1M5A8F1 160 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 OR2A4O95047 310 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 IFNA7P01567 189 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 CD74P04233 296 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 ITGB2P05107 769 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 CX3CR1P49238 355 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 ZNF121P58317 390 aaPredicted RBP12.12□□□□□ -0.47
THBS3-202ENST00000428962 H3F3AP84243 136 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
THBS3-202ENST00000428962 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
THBS3-202ENST00000428962 ARMC10Q8N2F6 343 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 OR8B12Q8NGG6 310 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 OR52N4Q8NGI2 321 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 OR13C9Q8NGT0 318 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 AQP3Q92482 292 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 GAL3ST1Q99999 423 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
THBS3-202ENST00000428962 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 G3V3Q6 166 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 RAMP1O60894 148 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 CBR3O75828 277 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 MSR1P21757 451 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 CCL1P22362 96 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 PRKXP51817 358 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 MFAP5Q13361 173 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 C10orf128Q5T292 105 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 DOK3Q7L591 496 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ACBD4Q8NC06 268 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 TNFAIP8L1Q8WVP5 186 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 SGCZQ96LD1 299 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 JSRP1Q96MG2 331 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 PNRC2Q9NPJ4 139 aaKnown RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 CA10Q9NS85 328 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 TEX51A0A1B0GUA7 166 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 DISC1C4P0D8 188 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 RER1O15258 196 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 DNPH1O43598 174 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 RGS11O94810 467 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 TOXO94900 526 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 AMY2AP04746 511 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ICAM2P13598 275 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ACP1P24666 158 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 NBL1P41271 181 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 IKZF1Q13422 519 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 MPPED2Q15777 294 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 C4orf46Q504U0 113 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 OR10K2Q6IF99 312 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 OR2W3Q7Z3T1 314 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 UXS1Q8NBZ7 420 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 NKD1Q969G9 470 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms