RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RAB39BQ96DA2 213 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF799Q96GE5 643 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 MAP6Q96JE9 813 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 PITX2Q99697 317 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 KCNJ15Q99712 375 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 SLC30A2Q9BRI3 323 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 HCAR1Q9BXC0 346 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 YIPF3Q9GZM5 350 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 ABCB9Q9NP78 766 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 PAPOLBQ9NRJ5 636 aaKnown RBP7.77□□□□□ -1.17
SMC1A-203ENST00000428014 DECR2Q9NUI1 292 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 MRPL15Q9P015 296 aaKnown RBP7.77□□□□□ -1.17
SMC1A-203ENST00000428014 STARD10Q9Y365 291 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 TMEM14AQ9Y6G1 99 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 TANC2Q9HCD6 1990 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 IGHV4-61A0A0C4DH41 118 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 CLDN25C9JDP6 229 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 PRR23D1E9PI22 279 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 G3V2T6 193 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 GMDSO60547 372 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF254O75437 659 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 NCR1O76036 304 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 MPZL1O95297 269 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 HLA-DQA2P01906 255 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 PRR23D2P0DMB1 279 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 SLC2A5P22732 501 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ALDH3B1P43353 468 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 CRISP1P54107 249 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 CDH15P55291 814 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ERVS71-1P61550 626 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 GINS1Q14691 196 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 SLC25A30Q5SVS4 291 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 SLC35F1Q5T1Q4 408 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 CFAP77Q6ZQR2 320 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 TMEM179BQ7Z7N9 219 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 PEG10Q86TG7 708 aaKnown RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 LINC01356Q8N9X3 169 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ATG16L2Q8NAA4 619 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 OTOSQ8NHW6 89 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 Q8TCH9 128 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 TRUB1Q8WWH5 349 aaKnown RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 HTRA1Q92743 480 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 RAB1CQ92928 201 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF582Q96NG8 517 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 INTS14Q96SY0 518 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF275Q9NSD4 429 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-203ENST00000428014 GRIP1Q9Y3R0 1128 aa7.76□□□□□ -1.17
SMC1A-203ENST00000428014 ZSCAN5BA6NJL1 495 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SLC22A31A6NKX4 558 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ZAR1LA6NP61 321 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF593O00488 134 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 PHYHO14832 338 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SMAD7O15105 426 aaKnown RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 TIMM8AO60220 97 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 LMX1BO60663 402 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SOX14O95416 240 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 IFNA2P01563 188 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 FAM157CP0CG43 387 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 NAT2P11245 290 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ATP6V1B1P15313 513 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 HNF1AP20823 631 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 GSTT1P30711 240 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 MPV17P39210 176 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 OPRL1P41146 370 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 CD200P41217 278 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SRP9P49458 86 aaKnown RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 CCL8P80075 99 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ROM1Q03395 351 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SCGB2A2Q13296 93 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 GK2Q14410 553 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 LCN1P1Q5VSP4 162 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SLX4IPQ5VYV7 408 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 NXNL2Q5VZ03 156 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ACSM5Q6NUN0 579 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 KCTD18Q6PI47 426 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 PGAP1Q75T13 922 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 DCXRQ7Z4W1 244 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 C1orf87Q8N0U7 546 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 MUC20Q8N307 709 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 FTMTQ8N4E7 242 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 CYB561A3Q8NBI2 242 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 OR10S1Q8NGN2 331 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 ASB17Q8WXJ9 295 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 CMBLQ96DG6 245 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SLAMF6Q96DU3 332 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 PLEKHA8Q96JA3 519 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 SMR3AQ99954 134 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 RBM4BQ9BQ04 359 aaKnown RBP7.75□□□□□ -1.17
SMC1A-203ENST00000428014 GABARAPL3Q9BY60 117 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 RERGLQ9H628 205 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 TRIM36Q9NQ86 728 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 USE1Q9NZ43 259 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 KCNS2Q9ULS6 477 aa7.75□□□□□ -1.17
SMC1A-203ENST00000428014 TRAV20A0A0B4J274 112 aa7.74□□□□□ -1.17
SMC1A-203ENST00000428014 DHRS7CA6NNS2 312 aa7.74□□□□□ -1.17
SMC1A-203ENST00000428014 A8MXK9 166 aa7.74□□□□□ -1.17
SMC1A-203ENST00000428014 E9PQ18 207 aa7.74□□□□□ -1.17
SMC1A-203ENST00000428014 J3QLI3 93 aa7.74□□□□□ -1.17
SMC1A-203ENST00000428014 TIPRLO75663 272 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms