RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 GPR87Q9BY21 358 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 ULBP2Q9BZM5 246 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 GPR84Q9NQS5 396 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF319Q9P2F9 582 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 FOXD3Q9UJU5 478 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 C21orf140B9A014 251 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 PRAF2O60831 178 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 GSTT2P0CG29 244 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 GTF2F2P13984 249 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 CNR1P21554 472 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 ANOS1P23352 680 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF84P51523 738 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 CAPZA1P52907 286 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 EIF3IQ13347 325 aaKnown RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 GFOD2Q3B7J2 385 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 SLC22A24Q8N4F4 322 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 ASCC1Q8N9N2 400 aaKnown RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 INTS12Q96CB8 462 aaKnown RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 CDC6Q99741 560 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 METTL17Q9H7H0 456 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 LRFN1Q9P244 771 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 ITGB1BP2Q9UKP3 347 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR5H15A6NDH6 313 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 CXCL13O43927 109 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 FCER2P06734 321 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ANXA3P12429 323 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ABOP16442 354 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 POU3F2P20265 443 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAB6AP20340 208 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 STARP49675 285 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 PMPCAQ10713 525 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 TNK1Q13470 666 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 SPINK14Q6IE38 97 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 SLC25A25Q6KCM7 469 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF782Q6ZMW2 699 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 GPX8Q8TED1 209 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ROBO4Q8WZ75 1007 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ITFG2Q969R8 447 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 PTX4Q96A99 478 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 B3GNT4Q9C0J1 378 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZFP64Q9NPA5 681 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 EMC3Q9P0I2 261 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 SLC5A6Q9Y289 635 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 A0A1B0GUH1 482 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 FABP7O15540 132 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 NDUFB6O95139 128 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 HPXP02790 462 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 LPLP06858 475 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 AKAIN1P0CW23 69 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 CXCL3P19876 107 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 CD96P40200 585 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAD52P43351 418 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 SSBP1Q04837 148 aaKnown RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 HYAL4Q2M3T9 481 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 MOGAT2Q3SYC2 334 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 Q5BKY6 102 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 HES3Q5TGS1 186 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ABHD17BQ5VST6 288 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 METTL11BQ5VVY1 283 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF529Q6P280 563 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 DOK3Q7L591 496 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR2V1Q8NHB1 315 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 NKD1Q969G9 470 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 ADGRG7Q96K78 797 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 BOKQ9UMX3 212 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-202ENST00000427494 A0A0A6YYH2 397 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 A6NJ64 397 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 F5H5K5 113 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 SULT1C2O00338 296 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 BPNT1O95861 308 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 TGM6O95932 706 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 SULT1A3P0DMM9 295 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 SULT1A4P0DMN0 295 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 CCL1P22362 96 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 CTSSP25774 331 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 CASRP41180 1078 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 ACTBP60709 375 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 ACTG1P63261 375 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 OR4D10Q8NGI6 311 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 OR8S1Q8NH09 359 aa12.33□□□□□ -0.44
APOBEC3D-202ENST00000427494 OR10D3Q8NH80 312 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms