RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 RPS2P15880 293 aaKnown RBP17.44■□□□□ 0.38
UBXN4-204ENST00000426921 OTX1P32242 354 aaPredicted RBP17.44■□□□□ 0.38
UBXN4-204ENST00000426921 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF404Q494X3 552 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 CPLX4Q7Z7G2 160 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 MOGAT3Q86VF5 341 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 KLBQ86Z14 1044 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 C1orf87Q8N0U7 546 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 OR52E2Q8NGJ4 325 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 Q8TCH9 128 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 ERGIC1Q969X5 290 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 MAP6Q96JE9 813 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 CDADC1Q9BWV3 514 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 DDX28Q9NUL7 540 aaKnown RBP17.44■□□□□ 0.38
UBXN4-204ENST00000426921 ARL8BQ9NVJ2 186 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 NDE1Q9NXR1 346 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF69Q9UC07 566 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 MIOXQ9UGB7 285 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 HLA-DQA2P01906 255 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 CD80P33681 288 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 PMELP40967 661 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 CD200P41217 278 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 MAGEA2P43356 314 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 RAD23AP54725 363 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 MALLQ13021 153 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 MAB21L1Q13394 359 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF770Q6IQ21 691 aaPredicted RBP17.43■□□□□ 0.38
UBXN4-204ENST00000426921 C16orf89Q6UX73 402 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 LINC00471Q8N535 108 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 SIGLECL1Q8N7X8 197 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 C3orf56Q8N813 242 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 OR10S1Q8NGN2 331 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 NEIL1Q96FI4 390 aaPredicted RBP17.43■□□□□ 0.38
UBXN4-204ENST00000426921 TMEM246Q9BRR3 403 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 BTBD10Q9BSF8 475 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 TRIM15Q9C019 465 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 EGLN3Q9H6Z9 239 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 ZMAT3Q9HA38 289 aaKnown RBP17.43■□□□□ 0.38
UBXN4-204ENST00000426921 IL20Q9NYY1 176 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 PPIAL4AQ9Y536 164 aa17.43■□□□□ 0.38
UBXN4-204ENST00000426921 IGHV2-70DA0A0C4DH43 119 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 M0R135 149 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF205O95201 554 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 LCATP04180 440 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 HLA-DPB1P04440 258 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 TPTEP56180 551 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 AWAT1Q58HT5 328 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 CLEC12AQ5QGZ9 265 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF362Q5T0B9 420 aaPredicted RBP17.42■□□□□ 0.38
UBXN4-204ENST00000426921 SLC35F1Q5T1Q4 408 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 RBMS3Q6XE24 437 aaKnown RBP17.42■□□□□ 0.38
UBXN4-204ENST00000426921 C9orf139Q6ZV77 190 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 NAA40Q86UY6 237 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 DEFB107AQ8IZN7 70 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 OR9Q2Q8NGE9 314 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 OR52L1Q8NGH7 329 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 OR4C15Q8NGM1 316 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF799Q96GE5 643 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 ARL2BPQ9Y2Y0 163 aa17.42■□□□□ 0.38
UBXN4-204ENST00000426921 PTBP3O95758 552 aaKnown RBP17.41■□□□□ 0.38
UBXN4-204ENST00000426921 PRTN3P24158 256 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 PRSS12P56730 875 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 GNB2P62879 340 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 LRRN1Q6UXK5 716 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 PGAP1Q75T13 922 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 PIGWQ7Z7B1 504 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 OR2T4Q8NH00 348 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 SPTSSAQ969W0 71 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 UPRTQ96BW1 309 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 PLEKHA8Q96JA3 519 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 C1orf147Q96MC9 270 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF48Q96MX3 618 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-204ENST00000426921 SLC22A4Q9H015 551 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 ACTR3BQ9P1U1 418 aa17.41■□□□□ 0.38
UBXN4-204ENST00000426921 IGHV3-64DA0A0J9YX35 117 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 DNAJC9-AS1A6NH13 148 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 DCTN3O75935 186 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 HKR1P10072 659 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 PSKH1P11801 424 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 ZNF823P16415 610 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 ATP6V1B2P21281 511 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 PYCR1P32322 319 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 PCK2Q16822 640 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 FAM201AQ5SY85 155 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 BTNL3Q6UXE8 466 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 DCDC5Q6ZRR9 648 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 RASSF6Q6ZTQ3 369 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 NLRC3Q7RTR2 1065 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 BCL6BQ8N143 479 aaPredicted RBP17.4■□□□□ 0.38
UBXN4-204ENST00000426921 PARP8Q8N3A8 854 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 CYB561A3Q8NBI2 242 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 PROKR2Q8NFJ6 384 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 OR8B3Q8NGG8 313 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 OR8D4Q8NGM9 314 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 SGMS2Q8NHU3 365 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 RAB40AQ8WXH6 277 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 SLCO4A1Q96BD0 722 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 OR8B2Q96RD0 313 aa17.4■□□□□ 0.38
UBXN4-204ENST00000426921 NOP16Q9Y3C1 178 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms