RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 OR4C15Q8NGM1 316 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR13C2Q8NGS9 318 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 Q8TCH9 128 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLC7A6Q92536 515 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LHX4Q969G2 390 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLCO4A1Q96BD0 722 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NUAK2Q9H093 628 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CNTD2Q9H8S5 307 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SRA1Q9HD15 236 aaKnown RBP10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 UFSP2Q9NUQ7 469 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ARMCX1Q9P291 453 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ADAM18Q9Y3Q7 739 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IER3IP1Q9Y5U9 82 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MGAM2Q2M2H8 2515 aa10.21□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A0A087WUU8 490 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CENPVL3A0A0U1RRI6 287 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LOC100653049A0A140TA62 436 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HMGB1P1B2RPK0 211 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SOCS2O14508 198 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GPR137BO60478 399 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 KRT34O76011 436 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PAHP00439 452 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HLA-DPB1P04440 258 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DBHP09172 617 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FBP1P09467 338 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CSF1P09603 554 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CTLA4P16410 223 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZNF823P16415 610 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TGFBR2P37173 567 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PSMB10P40306 273 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MDH1P40925 334 aaKnown RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CD200P41217 278 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GPR4P46093 362 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SMIM11AP58511 58 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MESTQ5EB52 335 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DHRS7BQ6IAN0 325 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LYPD2Q6UXB3 125 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 Q6ZTK2 550 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GALNT4Q8N4A0 578 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LINC01006Q8NI28 216 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DMRTB1Q96MA1 342 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 NRIP3Q9NQ35 241 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 VSX1Q9NZR4 365 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TMCC3Q9ULS5 477 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZNF281Q9Y2X9 895 aa10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SOX21Q9Y651 276 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A0A1B0GVI7 797 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A6NLC8 198 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GPR37O15354 613 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MLNRO43193 412 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM20BO75063 409 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CRYBA2P53672 197 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ARF6P62330 175 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TAF13Q15543 124 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM201AQ5SY85 155 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RUSC1-AS1Q66K80 236 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SFRP4Q6FHJ7 346 aaPredicted RBP10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC36A1Q7Z2H8 476 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM110DQ8TAY7 271 aaPredicted RBP10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ATF6BQ99941 703 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 OPA3Q9H6K4 179 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SP140LQ9H930 580 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 WDR76Q9H967 626 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 KPTNQ9Y664 436 aa10.19□□□□□ -0.78
HLA-DQB3-203ENST00000425319 WNK2Q9Y3S1 2297 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 hCG_1807616A0A1W2PRN6 198 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C5orf63A6NC05 138 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 OOEPA6NGQ2 149 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 UNC119BA6NIH7 251 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IMPA2O14732 288 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ALX3O95076 343 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 H1F0P07305 194 aaKnown RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GRPP07492 148 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CA6P23280 308 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IFNGR2P38484 337 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DDOSTP39656 456 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 NAA10P41227 235 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IER3P46695 156 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ERFP50548 548 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC7A2P52569 658 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MAB21L1Q13394 359 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 BLMHQ13867 455 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GK2Q14410 553 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MICBQ29980 383 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FBLN7Q53RD9 439 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FGD3Q5JSP0 725 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C11orf88Q6PI97 169 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TBPL2Q6SJ96 375 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SMARCD3Q6STE5 483 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZNF841Q6ZN19 808 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms