RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GGTLC2Q14390 218 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 TSTQ16762 297 aaKnown RBP13.47□□□□□ -0.25
BRAT1-202ENST00000421712 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 LRRN1Q6UXK5 716 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 MRPL21Q7Z2W9 205 aaKnown RBP13.47□□□□□ -0.25
BRAT1-202ENST00000421712 OR5AS1Q8N127 324 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ASB17Q8WXJ9 295 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 GTF3AQ92664 365 aaKnown RBP13.47□□□□□ -0.25
BRAT1-202ENST00000421712 HAVCR1Q96D42 359 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 SP140LQ9H930 580 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ADGRL4Q9HBW9 690 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 CYSLTR2Q9NS75 346 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 DECR2Q9NUI1 292 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 CLN6Q9NWW5 311 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 HAO2Q9NYQ3 351 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-202ENST00000421712 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 IKZF2Q9UKS7 526 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 C17orf100A8MU93 164 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 SLC16A6O15403 523 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 MPZL2O60487 215 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 SBK2P0C263 348 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 CD99P14209 185 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 DAOP14920 347 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 OTX1P32242 354 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-202ENST00000421712 PDLIM4P50479 330 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-202ENST00000421712 DSCR9P59020 149 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 IL5RAQ01344 420 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 POU4F2Q12837 409 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 SNAI3Q3KNW1 292 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 ZMAT1Q5H9K5 638 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 OGFRL1Q5TC84 451 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-202ENST00000421712 OR2T2Q6IF00 324 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 COLCA1Q6ZS62 124 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 USP51Q70EK9 711 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 PGAP1Q75T13 922 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 RHOUQ7L0Q8 258 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 DHRSXQ8N5I4 330 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 OR10H4Q8NGA5 316 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 UBASH3BQ8TF42 649 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 PGAM5Q96HS1 289 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 Q96MT0 163 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 MNTQ99583 582 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 TBX5Q99593 518 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 MROQ9BYG7 248 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 MSL2Q9HCI7 577 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.46□□□□□ -0.25
BRAT1-202ENST00000421712 COPS3Q9UNS2 423 aa13.46□□□□□ -0.25
BRAT1-202ENST00000421712 E9PQ18 207 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 PHYHO14832 338 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 CASQ2O14958 399 aaPredicted RBP13.45□□□□□ -0.26
BRAT1-202ENST00000421712 CSF3P09919 207 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 SELEP16581 610 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 KITLGP21583 273 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 MAGEB1P43366 347 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 PRSS12P56730 875 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 CXCR4P61073 352 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 CCL8P80075 99 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 TMED1Q13445 227 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 TNK1Q13470 666 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 OCLNQ16625 522 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 TIGD6Q17RP2 521 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 TMEM255AQ5JRV8 349 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 TTC23Q5W5X9 447 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 ENTHD1Q8IYW4 607 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 OR2AE1Q8NHA4 323 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 FAM168AQ92567 244 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 NIPAL2Q9H841 368 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 RNPEPL1Q9HAU8 725 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 CGGBP1Q9UFW8 167 aaPredicted RBP13.45□□□□□ -0.26
BRAT1-202ENST00000421712 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
BRAT1-202ENST00000421712 GGT3PA6NGU5 568 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 DLGAP1O14490 977 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 SMAD7O15105 426 aaKnown RBP13.44□□□□□ -0.26
BRAT1-202ENST00000421712 OR2T7P0C7T2 308 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 MTNR1AP48039 350 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 MMP15P51511 669 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 RIDAP52758 137 aaKnown RBP13.44□□□□□ -0.26
BRAT1-202ENST00000421712 ZNF92Q03936 586 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 GK2Q14410 553 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-202ENST00000421712 GFOD2Q3B7J2 385 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 SLC25A30Q5SVS4 291 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 GLYATL3Q5SZD4 288 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 ZNF322Q6U7Q0 402 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-202ENST00000421712 BHLHE23Q8NDY6 225 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 OR2Z1Q8NG97 314 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 OR2T27Q8NH04 317 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-202ENST00000421712 RNFT2Q96EX2 444 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 OR10A2Q9H208 303 aa13.44□□□□□ -0.26
BRAT1-202ENST00000421712 MYOZ1Q9NP98 299 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms