RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 OR10S1Q8NGN2 331 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 TMIGD2Q96BF3 282 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 NMNAT3Q96T66 252 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 CDADC1Q9BWV3 514 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 KRCC1Q9NPI7 259 aaPredicted RBP12.35□□□□□ -0.43
RPS28-201ENST00000417088 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
RPS28-201ENST00000417088 ABCD2Q9UBJ2 740 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 F5H5K5 113 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 ARPC3O15145 178 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
RPS28-201ENST00000417088 CCDC22O60826 627 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 IRF2P14316 349 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
RPS28-201ENST00000417088 OMGP23515 440 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 NUDT2P50583 147 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 RAD23AP54725 363 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 PSME3P61289 254 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 FGF12P61328 243 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 RFX4Q33E94 735 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 CLEC12AQ5QGZ9 265 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 GLYATQ6IB77 296 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 DCDC5Q6ZRR9 648 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 SPATC1Q76KD6 591 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 C19orf18Q8NEA5 215 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 Q8TCH9 128 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 SLCO4A1Q96BD0 722 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 PITX2Q99697 317 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 OR52D1Q9H346 318 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 RPRD1BQ9NQG5 326 aaKnown RBP12.34□□□□□ -0.43
RPS28-201ENST00000417088 CYB5R1Q9UHQ9 305 aa12.34□□□□□ -0.43
RPS28-201ENST00000417088 C22orf46C9J442 243 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 PHYHO14832 338 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 FAM20BO75063 409 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 RENP00797 406 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 LCATP04180 440 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 SLC6A6P31641 620 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 GGT2P36268 569 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 PSMB10P40306 273 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 CD200P41217 278 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
RPS28-201ENST00000417088 TRAP1Q12931 704 aaKnown RBP12.33□□□□□ -0.44
RPS28-201ENST00000417088 ECH1Q13011 328 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 MPPED2Q15777 294 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 SLC36A3Q495N2 470 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 OR11L1Q8NGX0 322 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 ATF6BQ99941 703 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
RPS28-201ENST00000417088 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 SAMD4AQ9UPU9 718 aaKnown RBP12.33□□□□□ -0.44
RPS28-201ENST00000417088 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
RPS28-201ENST00000417088 MALLQ13021 153 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 GPR157Q5UAW9 335 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 OR2AJ1Q8NGZ0 328 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 IFT27Q9BW83 186 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 FN3KQ9H479 309 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 CTSZQ9UBR2 303 aa12.32□□□□□ -0.44
RPS28-201ENST00000417088 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 FAM181BA6NEQ2 426 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 SRRM5B3KS81 715 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 ENSAO43768 121 aaKnown RBP12.31□□□□□ -0.44
RPS28-201ENST00000417088 GADD45GO95257 159 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 SEMG1P04279 462 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 CA6P23280 308 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 TPTEP56180 551 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 SMIM11AP58511 58 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 BPIFB3P59826 476 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 DEFA6Q01524 100 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 OR8G1Q15617 311 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 Q6YL49 198 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
RPS28-201ENST00000417088 SDR9C7Q8NEX9 313 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 SPRYD4Q8WW59 207 aaPredicted RBP12.31□□□□□ -0.44
RPS28-201ENST00000417088 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 NOX4Q9NPH5 578 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 TNFRSF19Q9NS68 423 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
RPS28-201ENST00000417088 RNF7Q9UBF6 113 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 V9GYQ6 96 aa12.31□□□□□ -0.44
RPS28-201ENST00000417088 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 TGP01266 2768 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 A0A1B0GUS0 222 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 CD300LBA8K4G0 201 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 M0R135 149 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 LGALS8O00214 317 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms