RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SSX7Q7RTT5 188 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 SFTPA2Q8IWL1 248 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 PLPP5Q8NEB5 264 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 OR9A4Q8NGU2 314 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 MFSD8Q8NHS3 518 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 SLC2A12Q8TD20 617 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 NEURL3Q96EH8 262 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 PGLYRP3Q96LB9 341 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 LINC00615Q96LM1 132 aaPredicted RBP7.07□□□□□ -1.28
SIK3-203ENST00000415541 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 KIR3DX1Q9H7L2 352 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 NOX4Q9NPH5 578 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 CEP250Q9BV73 2442 aa7.07□□□□□ -1.28
SIK3-203ENST00000415541 DUXAA6NLW8 204 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CDRT15L2A8MXV6 281 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 FRS3O43559 492 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TMPRSS11DO60235 418 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 MRPL3P09001 348 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 HLA-GP17693 338 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CSRP2Q16527 193 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 BTNL8Q6UX41 500 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 MEX3DQ86XN8 651 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 LINC01555Q8NAE3 123 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 IFI44Q8TCB0 444 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 RAB39BQ96DA2 213 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 DGAT2Q96PD7 388 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CDX2Q99626 313 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 NELFAQ9H3P2 528 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 LRIT1Q9P2V4 623 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 DNAJB11Q9UBS4 358 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 OR5V1Q9UGF6 321 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 FARSAQ9Y285 508 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 MMP24Q9Y5R2 645 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CCDC88CQ9P219 2028 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TMEM269A0A1B0GVZ9 245 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CPSF4LA6NMK7 179 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 A8MXE2 369 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TP53I11O14683 189 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 OGG1O15527 345 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SPINT1O43278 529 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 NPSP0C0P6 89 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 PTHLHP12272 177 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 GABRA3P34903 492 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CX3CR1P49238 355 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CLDN12P56749 244 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SCAND1P57086 179 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 ERVFC1-1P60608 527 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SIRPAP78324 504 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 IL13RA1P78552 427 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 LTBQ06643 244 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 RPTNQ6XPR3 784 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SHISA6Q6ZSJ9 500 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 RNF44Q7L0R7 432 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 LYG2Q86SG7 212 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 PPP1R3BQ86XI6 285 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 GABRG1Q8N1C3 465 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CPEB3Q8NE35 698 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 OR10A7Q8NGE5 316 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 OR56A1Q8NGH5 318 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TM4SF18Q96CE8 201 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 COX14Q96I36 57 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SAMD8Q96LT4 415 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 GABRG3Q99928 467 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 FAM212BQ9NTI7 297 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 NCDNQ9UBB6 729 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 ZNF223Q9UK11 482 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 PUS1Q9Y606 427 aaKnown RBP eCLIP7.06□□□□□ -1.28
SIK3-203ENST00000415541 FRMPD3Q5JV73 1810 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TRAV18A0A075B6X5 111 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 ZNF724A8MTY0 619 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TRDCB7Z8K6 153 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 J3QRE1 110 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 TCF21O43680 179 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BKO60814 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 DIRAS3O95661 229 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 EML2O95834 649 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CD3DP04234 171 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BJP06899 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CELA2BP08218 269 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 SOD3P08294 240 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 OR5AC1P0C628 307 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BOP23527 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BBP33778 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 LPAR6P43657 344 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BDP58876 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BCP62807 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 RAE1P78406 368 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 MRPS11P82912 194 aaKnown RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 MEF2DQ14814 521 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CDK5R1Q15078 307 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST2H2BEQ16778 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 IQCJQ1A5X6 159 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 ARSJQ5FYB0 599 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.06□□□□□ -1.28
SIK3-203ENST00000415541 LRRC25Q8N386 305 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms