RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 KCNS2Q9ULS6 477 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RPL36Q9Y3U8 105 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PIK3C2GO75747 1445 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PTPRUQ92729 1446 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 AK9Q5TCS8 1911 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NEDD4P46934 1319 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 IGSF9BQ9UPX0 1349 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TAF1P21675 1872 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 AKAP12Q02952 1782 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CASZ1Q86V15 1759 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MEIKINA0A087WXM9 373 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 NSG1A0A0A6YYJ2 146 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 A0A1B0GU03 582 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 UBE2QL1A1L167 161 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LRP5LA4QPB2 252 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM150BA6NC51 233 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SERINC4A6NH21 518 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 DHRS7CA6NNS2 312 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 A8MXK9 166 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM150CB9EJG8 249 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 F8VVB4 439 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 F8VWA3 439 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CORTO00230 105 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MBTPS2O43462 519 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SYNGR1O43759 233 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RAMP2O60895 175 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ALOX12BO75342 701 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ATP6AP2O75787 350 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MMP23AO75900 390 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 STC2O76061 302 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 IGHV2-5P01817 119 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CRYGDP07320 174 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CD48P09326 243 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TACSTD2P09758 323 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LIMS3P0CW19 117 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LIMS4P0CW20 117 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CT45A8P0DMV1 189 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CT45A9P0DMV2 189 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 IL7P13232 177 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CYBAP13498 195 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ARSBP15848 533 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 IL1RNP18510 177 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 PRKACGP22612 351 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ZBTB25P24278 435 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 HTR1DP28221 377 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LOXP28300 417 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CDKN2BP42772 138 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 NSG1P42857 185 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DS4P43632 304 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RPL21P46778 160 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TCL1AP56279 114 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TMPRSS3P57727 454 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LILRA4P59901 499 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 HBA1P69905 142 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SLC35B1P78383 322 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CDK5Q00535 292 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 EWSR1Q01844 656 aaKnown RBP eCLIP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 BCL2L1Q07817 233 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CRYZQ08257 329 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF415Q09FC8 603 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 KLRB1Q12918 225 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 GPR17Q13304 367 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MFAP5Q13361 173 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 EIF2B1Q14232 305 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 QPRTQ15274 297 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 HIST3H3Q16695 136 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 DUOXA1Q1HG43 343 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SNAI3Q3KNW1 292 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ACSF3Q4G176 576 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CT45A2Q5DJT8 189 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CARD16Q5EG05 197 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SOHLH1Q5JUK2 328 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CPTPQ5TA50 214 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 GLYATQ6IB77 296 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 OR4A47Q6IF82 309 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ANKRD16Q6P6B7 361 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 DCUN1D2Q6PH85 259 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 WDR74Q6RFH5 385 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LCTLQ6UWM7 567 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 NAPRTQ6XQN6 538 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LANCL3Q6ZV70 420 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ANKRD33Q7Z3H0 272 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RNF144BQ7Z419 303 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 HSD17B13Q7Z5P4 300 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CROCCP2Q86T23 111 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MOB3BQ86TA1 216 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 IZUMO1Q8IYV9 350 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 H1FOOQ8IZA3 346 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 BLIDQ8IZY5 108 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 PARP16Q8N5Y8 322 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CHST4Q8NCG5 386 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 OR10G9Q8NGN4 311 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 OR5K1Q8NHB7 308 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 PLPPR1Q8TBJ4 325 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SFXN5Q8TD22 340 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SMAP2Q8WU79 429 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms