RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 NUAK2Q9H093 628 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 SMURF1Q9HCE7 757 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 IGLV1-36A0A0B4J1U3 117 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 IGHV1-69DA0A0B4J2H0 117 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 BBIP1A8MTZ0 92 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 MRASO14807 208 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
LIMS2-210ENST00000413578 TOX4O94842 621 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 NDUFB2O95178 105 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 IGHV1-69P01742 117 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 IFNW1P05000 195 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 ACSM4P0C7M7 580 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 CDKN2AP42771 156 aaKnown RBP10.05□□□□□ -0.8
LIMS2-210ENST00000413578 CD276Q5ZPR3 534 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 PGM2L1Q6PCE3 622 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 Q6ZSV7 163 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 C1QL4Q86Z23 238 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 GJC3Q8NFK1 279 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 TBC1D15Q8TC07 691 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 SLC7A13Q8TCU3 470 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 UBE2FQ969M7 185 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 TSSK2Q96PF2 358 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 ANKRD19PQ9H560 264 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 C16orf95Q9H693 158 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 PNRC2Q9NPJ4 139 aaKnown RBP10.05□□□□□ -0.8
LIMS2-210ENST00000413578 GMPR2Q9P2T1 348 aaKnown RBP10.05□□□□□ -0.8
LIMS2-210ENST00000413578 RYR3Q15413 4870 aa10.05□□□□□ -0.8
LIMS2-210ENST00000413578 DOCK11Q5JSL3 2073 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 A0A0G2JND7 137 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 A0A0U1RQK1 487 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 ELOVL7A1L3X0 281 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 LGALS8O00214 317 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 IRF2P14316 349 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 ANOS1P23352 680 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 SLC18B1Q6NT16 456 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 CORO6Q6QEF8 472 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 CFAP77Q6ZQR2 320 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 OR11L1Q8NGX0 322 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 DYDC1Q8WWB3 177 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 LZICQ8WZA0 190 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 FAM46AQ96IP4 442 aaKnown RBP10.04□□□□□ -0.8
LIMS2-210ENST00000413578 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 HCAR1Q9BXC0 346 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 TRIM15Q9C019 465 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 RERGLQ9H628 205 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 TCF7L1Q9HCS4 588 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 UFSP2Q9NUQ7 469 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 INTS9Q9NV88 658 aaKnown RBP10.04□□□□□ -0.8
LIMS2-210ENST00000413578 CMTM6Q9NX76 183 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 KIF17Q9P2E2 1029 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 ERVK-18Q9QC07 812 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 TMEM5Q9Y2B1 443 aa10.04□□□□□ -0.8
LIMS2-210ENST00000413578 A0A1W2PRQ8 180 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 SOCS2O14508 198 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 NDUFA2O43678 99 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 TSPAN9O75954 239 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 MDH1P40925 334 aaKnown RBP10.03□□□□□ -0.8
LIMS2-210ENST00000413578 OMPP47874 163 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 DBPQ10586 325 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-210ENST00000413578 KLF10Q13118 480 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 DGCR6Q14129 220 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 KCNJ8Q15842 424 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 METTL11BQ5VVY1 283 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 SFRP4Q6FHJ7 346 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-210ENST00000413578 DPY19L2P2Q6ZN68 376 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 NAA40Q86UY6 237 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 OR6V1Q8N148 313 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 PNLDC1Q8NA58 520 aaKnown RBP10.03□□□□□ -0.8
LIMS2-210ENST00000413578 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 SLC26A10Q8NG04 563 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 SLCO4A1Q96BD0 722 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 HSH2DQ96JZ2 352 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 NDEL1Q9GZM8 345 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 MMADHCQ9H3L0 296 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-210ENST00000413578 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 RPS6KA6Q9UK32 745 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 B9D1Q9UPM9 204 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 IER3IP1Q9Y5U9 82 aa10.03□□□□□ -0.8
LIMS2-210ENST00000413578 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 ADAM20O43506 726 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 LHBP01229 141 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 CA6P23280 308 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 CRABP1P29762 137 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 GGT2P36268 569 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 ECH1Q13011 328 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 IFI44LQ53G44 452 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
LIMS2-210ENST00000413578 TEX36Q5VZQ5 186 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 GDPGP1Q6ZNW5 385 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 FAM90A1Q86YD7 464 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 GCSAMQ8N6F7 178 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms