RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 ROM1Q03395 351 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 PLEKHN1Q494U1 663 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ZNF776Q68DI1 518 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 TAF8Q7Z7C8 310 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ZNF584Q8IVC4 421 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 SLC24A4Q8NFF2 622 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 OR4S1Q8NGB4 309 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 PAQR8Q8TEZ7 354 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CNTNAP3BQ96NU0 1288 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 RIMS4Q9H426 269 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 TAS2R4Q9NYW5 299 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CKLFQ9UBR5 152 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 TMED7Q9Y3B3 224 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 MEX3AA1L020 520 aaKnown RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 POM121BA6NF01 834 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 TMEM235A6NFC5 223 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ZNF208O43345 1280 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 OIP5O43482 229 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 HOXC4P09017 264 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 SPP1P10451 314 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 PGAM2P15259 253 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 AVPR2P30518 371 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 NPBWR1P48145 328 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ARRB1P49407 418 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 NR0B1P51843 470 aaKnown RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CXADRP78310 365 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 IL13RA1P78552 427 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 SKP2Q13309 424 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 TSC22D1Q15714 1073 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CD226Q15762 336 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 MCEMP1Q8IX19 187 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 OR4K17Q8NGC6 315 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 ACKR4Q9NPB9 350 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 MMP26Q9NRE1 261 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CYTL1Q9NRR1 136 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 STARD5Q9NSY2 213 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 CGGBP1Q9UFW8 167 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-210ENST00000413197 SLCO1B1Q9Y6L6 691 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 MPDZO75970 2070 aa12.38□□□□□ -0.43
COPS7B-210ENST00000413197 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 NUDT21O43809 227 aaKnown RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CRYBA1P05813 215 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CD2P06729 351 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 ABOP16442 354 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 ADAM8P78325 824 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 IGLV3-21P80748 117 aaPredicted RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 SRSF5Q13243 272 aaKnown RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 NKPD1Q17RQ9 610 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 RNASE10Q5GAN6 216 aaKnown RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 SLC35D2Q76EJ3 337 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CD163Q86VB7 1156 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 LYPD6Q86Y78 171 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 ARHGEF39Q8N4T4 335 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 C16orf52Q8NHV5 167 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 ZNF524Q96C55 264 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TBC1D3DA0A087WVF3 549 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 A6NLC8 198 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TBC1D3LB9A6J9 549 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CSN2P05814 226 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TBC1D3HP0C7X1 549 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 FAM157CP0CG43 387 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 PSMB6P28072 239 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■■■□□ 17.3
COPS7B-210ENST00000413197 MFGE8Q08431 387 aaPredicted RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 MST1LQ2TV78 715 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 AVPI1Q5T686 147 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TBC1D3CQ6IPX1 549 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 DRAM2Q6UX65 266 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CATSPERDQ86XM0 798 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TBC1D3Q8IZP1 549 aaPredicted RBP12.37□□□□□ -0.43
COPS7B-210ENST00000413197 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 TREM1Q9NP99 234 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 UQCC1Q9NVA1 299 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
COPS7B-210ENST00000413197 FITM1A5D6W6 292 aa12.36□□□□□ -0.43
COPS7B-210ENST00000413197 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
COPS7B-210ENST00000413197 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
COPS7B-210ENST00000413197 EFSO43281 561 aa12.36□□□□□ -0.43
COPS7B-210ENST00000413197 HCRTR1O43613 425 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms