RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TRAV8-2A0A0B4J237 113 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CTSVO60911 334 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ATP1B1P05026 303 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ACP1P24666 158 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SGSHP51688 502 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 RRADP55042 308 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ALYREFQ86V81 257 aaKnown RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR8A1Q8NGG7 326 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 EDARADDQ8WWZ3 215 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PDLIM2Q96JY6 352 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 GPR88Q9GZN0 384 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 LIN28AQ9H9Z2 209 aaKnown RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 Q9N2K0 584 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 KLK14Q9P0G3 267 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 V9GY05 133 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CHD1O14646 1710 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MYOM2P54296 1465 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 B3GALT4O96024 378 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PDGFAP04085 211 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLC6A1P30531 599 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 GPR85P60893 370 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 FRG2Q64ET8 278 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 LRRTM4Q86VH4 590 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZFP41Q8N8Y5 198 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 WBP2Q969T9 261 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TOX2Q96NM4 488 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 FRG2BQ96QU4 278 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 KDM5BQ9UGL1 1544 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ADGRL2O95490 1459 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PNV4 684 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM250H0YL14 139 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CD5LO43866 347 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 IGHG1P01857 330 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ITGB7P26010 798 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 FOLR3P41439 243 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 YBEYP58557 167 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SKP2Q13309 424 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 IL10RAQ13651 578 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CYBRD1Q53TN4 286 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLC35D3Q5M8T2 416 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TIMM23BQ5SRD1 257 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 GALNT16Q8N428 558 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR13H1Q8NG92 308 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR5H6Q8NGV6 325 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLAMF6Q96DU3 332 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 C20orf24Q9BUV8 137 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 GGTLC1Q9BX51 225 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PARP12Q9H0J9 701 aaKnown RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MAGIXQ9H6Y5 334 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PIGLQ9Y2B2 252 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 GPR55Q9Y2T6 319 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CGB1A6NKQ9 187 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR6C75A6NL08 312 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 H3BMH7 237 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 EMC8O43402 210 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MBTPS2O43462 519 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SS18L1O75177 396 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLC5A2P31639 672 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SEMG2Q02383 582 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 KLRC3Q07444 240 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PYCR3Q53H96 274 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MPV17L2Q567V2 206 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 FIGLAQ6QHK4 219 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLC51AQ86UW1 340 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR51S1Q8NGJ8 323 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR10J6PQ8NGY7 276 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF778Q96MU6 729 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 C12orf49Q9H741 205 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TLR9Q9NR96 1032 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM140Q9NV12 185 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MOKQ9UQ07 419 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZFP37Q9Y6Q3 630 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 P2RY10O00398 339 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CSF3P09919 207 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PEX2P28328 305 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SUMO3P55854 103 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 MYBPHQ13203 477 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF506Q5JVG8 444 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR51E1Q8TCB6 317 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CPEB1Q9BZB8 566 aaKnown RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CHST6Q9GZX3 395 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CLEC5AQ9NY25 188 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM2Q9UHN6 1383 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 CLPSL1A2RUU4 121 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 EFSO43281 561 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CKMT2P17540 419 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 C21orf33P30042 268 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 WDR5P61964 334 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 EMX2Q04743 252 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PNRC1Q12796 327 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SERTAD2Q14140 314 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 NKX1-1Q15270 411 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PRICKLE4Q2TBC4 344 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 NHSL2Q5HYW2 709 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TCTEX1D4Q5JR98 221 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LIPNQ5VXI9 398 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FCRLAQ7L513 359 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HOGA1Q86XE5 327 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms