RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ASPHD2Q6ICH7 369 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 CORO6Q6QEF8 472 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 HIST2H3AQ71DI3 136 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 TMEM123Q8N131 208 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 FAM109AQ8N4B1 249 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 OR1M1Q8NGA1 313 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 JSRP1Q96MG2 331 aaPredicted RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ATG5Q9H1Y0 275 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 TP63Q9H3D4 680 aaPredicted RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 A0A0U1RQV5 110 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF814B7Z6K7 855 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 H0YC42 278 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 P2RY10O00398 339 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 NDUFB6O95139 128 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 WNT11O96014 354 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 UBBP0CG47 229 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF20P17024 532 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 RCVRNP35243 200 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 GNALP38405 381 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 CLDN6P56747 220 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 TAS2R19P59542 299 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 MRPS34P82930 218 aaKnown RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ECH1Q13011 328 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 RBMS2Q15434 407 aaKnown RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 STK11Q15831 433 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 CFAP77Q6ZQR2 320 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 TIPARPQ7Z3E1 657 aaKnown RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 OR2W3Q7Z3T1 314 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 WDFY1Q8IWB7 410 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 C20orf196Q8IYI0 205 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ASCC1Q8N9N2 400 aaKnown RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 PLPP7Q8NBV4 271 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 OR14L1PQ8NHC6 308 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 GPX8Q8TED1 209 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ASB13Q8WXK3 278 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 FGGYQ96C11 551 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 DMRTB1Q96MA1 342 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ASH2LQ9UBL3 628 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 GHRLQ9UBU3 117 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 B4GALT7Q9UBV7 327 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 KLK11Q9UBX7 282 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
LIMS1-205ENST00000410093 EPG5Q9HCE0 2579 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 TRAV18A0A075B6X5 111 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 C9orf172C9J069 976 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 EIF1AYO14602 144 aaKnown RBP12□□□□□ -0.49
LIMS1-205ENST00000410093 DHHO43323 396 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 ICMTO60725 284 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 MT-CO3P00414 261 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 CHRM2P08172 466 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 SULT1A3P0DMM9 295 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 SULT1A4P0DMN0 295 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 CCR6P51684 374 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 NKX2-5P52952 324 aaPredicted RBP12□□□□□ -0.49
LIMS1-205ENST00000410093 CARD18P57730 90 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 RNASE12Q5GAN4 147 aaKnown RBP12□□□□□ -0.49
LIMS1-205ENST00000410093 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 FAM27BQ5VT28 67 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 CARD17Q5XLA6 110 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 Q6ZSR3 168 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 JAGN1Q8N5M9 183 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 TMEM229BQ8NBD8 167 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 GIMAP1Q8WWP7 306 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 PPP1R14AQ96A00 147 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 CPNE4Q96A23 557 aaPredicted RBP12□□□□□ -0.49
LIMS1-205ENST00000410093 RADILQ96JH8 1075 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 NOX3Q9HBY0 568 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 ZFP64Q9NPA5 681 aa12□□□□□ -0.49
LIMS1-205ENST00000410093 PNRC2Q9NPJ4 139 aaKnown RBP12□□□□□ -0.49
LIMS1-205ENST00000410093 PTPRBP23467 1997 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 KNTC1P50748 2209 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 A0A0J9YW62 118 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 A0A1B0GTI1 187 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 DHRS7CA6NNS2 312 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 A8MV72 311 aaPredicted RBP11.99□□□□□ -0.49
LIMS1-205ENST00000410093 TCEA1P23193 301 aaKnown RBP11.99□□□□□ -0.49
LIMS1-205ENST00000410093 CX3CR1P49238 355 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 FOXK1P85037 733 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 GALK2Q01415 458 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 Q0VFX4 171 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 NRN1LQ496H8 165 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 CPT1CQ8TCG5 803 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 FAM46BQ96A09 425 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 FAM173AQ9BQD7 235 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 PAQR5Q9NXK6 330 aaPredicted RBP11.99□□□□□ -0.49
LIMS1-205ENST00000410093 DKK4Q9UBT3 224 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF391Q9UJN7 358 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 MRPS18BQ9Y676 258 aaKnown RBP11.99□□□□□ -0.49
LIMS1-205ENST00000410093 FRYQ5TBA9 3013 aa11.99□□□□□ -0.49
LIMS1-205ENST00000410093 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms