RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 OTOSQ8NHW6 89 aa26.51■■□□□ 1.83
TRAF3IP1-203ENST00000409739 RNF133Q8WVZ7 376 aa26.51■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CHODLQ9H9P2 273 aa26.51■■□□□ 1.83
TRAF3IP1-203ENST00000409739 USE1Q9NZ43 259 aa26.51■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TLX2O43763 284 aaPredicted RBP26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 RP2O75695 350 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 PRKXP51817 358 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 GRB2P62993 217 aaKnown RBP26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SNAI3Q3KNW1 292 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 Q6ZR03 302 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 BCDIN3DQ7Z5W3 292 aaKnown RBP26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TMEM163Q8TC26 289 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SAP30LQ9HAJ7 183 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 DECR2Q9NUI1 292 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ZDHHC8Q9ULC8 765 aa26.5■■□□□ 1.83
TRAF3IP1-203ENST00000409739 C2CD3Q4AC94 2353 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 MALRD1Q5VYJ5 2156 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 IGHV4-61A0A0C4DH41 118 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CDK5R2Q13319 367 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 LCN1P1Q5VSP4 162 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 OR2T2Q6IF00 324 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 OR5AS1Q8N127 324 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 PQLC1Q8N2U9 271 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ZNF454Q8N9F8 522 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TEAD3Q99594 435 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ZNF275Q9NSD4 429 aaPredicted RBP26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 KLHDC2Q9Y2U9 406 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 HIVEP2P31629 2446 aa26.49■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TPD52L2O43399 206 aaKnown RBP26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 LYNP07948 512 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SLC15A1P46059 708 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 PRSS12P56730 875 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 GK2Q14410 553 aaPredicted RBP26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TMEM249Q2WGJ8 235 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 IL4I1Q96RQ9 567 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 DIRC2Q96SL1 478 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 TOR3AQ9H497 397 aa26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 FN1P02751 2386 aaKnown RBP26.48■■□□□ 1.83
TRAF3IP1-203ENST00000409739 C5orf63A6NC05 138 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CDC14BO60729 498 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CD55P08174 381 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SLC2A1P11166 492 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 OPRL1P41146 370 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ALDH3A2P51648 485 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 MALLQ13021 153 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 AADACL4Q5VUY2 407 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 NXNL2Q5VZ03 156 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 USP51Q70EK9 711 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 RHOUQ7L0Q8 258 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CBR4Q8N4T8 237 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ZNF283Q8N7M2 679 aa26.47■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ZFHX3Q15911 3703 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 NIPBLQ6KC79 2804 aaeCLIP26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 IGHV1-69-2A0A0G2JMI3 117 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 IQCF6A8MYZ5 107 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 MRPL3P09001 348 aaKnown RBP26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 HSD11B1P28845 292 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CRYBB2P43320 205 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 CX3CR1P49238 355 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SPRNQ5BIV9 151 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 SLC16A9Q7RTY1 509 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 THEM6Q8WUY1 208 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 ORC6Q9Y5N6 252 aa26.46■■□□□ 1.83
TRAF3IP1-203ENST00000409739 NF1P21359 2839 aa26.45■■□□□ 1.83
TRAF3IP1-203ENST00000409739 LILRA1O75019 489 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 TRIP10Q15642 601 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 GLYATL3Q5SZD4 288 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 MEPCEQ7L2J0 689 aaKnown RBP26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 BHLHE23Q8NDY6 225 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 OR8G5Q8NG78 346 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 OR2Z1Q8NG97 314 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 OR2AE1Q8NHA4 323 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 ELMOD3Q96FG2 381 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 C9orf16Q9BUW7 83 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 YIPF3Q9GZM5 350 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 EGLN1Q9GZT9 426 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 CACNG2Q9Y698 323 aa26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 SONP18583 2426 aaKnown RBP26.45■■□□□ 1.82
TRAF3IP1-203ENST00000409739 TACSTD2P09758 323 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 HCCSP53701 268 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 RAD23AP54725 363 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 TNFAIP6P98066 277 aaPredicted RBP26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 ZNF92Q03936 586 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 PGAP1Q75T13 922 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 MRPL21Q7Z2W9 205 aaKnown RBP26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 STMN2Q93045 179 aa26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 ZNF582Q96NG8 517 aaPredicted RBP26.44■■□□□ 1.82
TRAF3IP1-203ENST00000409739 SLC22A31A6NKX4 558 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 CD5LO43866 347 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 H2BFMP0C1H6 154 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 SELEP16581 610 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 ALOX5APP20292 161 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 GPR6P46095 362 aaPredicted RBP26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 GID4Q8IVV7 300 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 CNN2Q99439 309 aaKnown RBP26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 DNAJC27Q9NZQ0 273 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 H2AFY2Q9P0M6 372 aaPredicted RBP26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 LAMP5Q9UJQ1 280 aa26.43■■□□□ 1.82
TRAF3IP1-203ENST00000409739 N6AMT1Q9Y5N5 214 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms