RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PGAM5Q96HS1 289 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 HRASLSQ9HDD0 168 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 TMEM138Q9NPI0 162 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 MED13Q9UHV7 2174 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 LOC390937A0A1W2PQ73 354 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 CYTIPO60759 359 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 KDM4BO94953 1096 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 SP1P08047 785 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 CTSSP25774 331 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 SLC6A9P48067 706 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 ELFN2Q5R3F8 820 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 FAM27BQ5VT28 67 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 GALNTL5Q7Z4T8 443 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 ADGRE4PQ86SQ3 457 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 OR13C9Q8NGT0 318 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 ABHD3Q8WU67 409 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 DMRTB1Q96MA1 342 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 PLEK2Q9NYT0 353 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 KLF13Q9Y2Y9 288 aaPredicted RBP18.23■□□□□ 0.51
USP39-203ENST00000409470 NCOA6Q14686 2063 aaPredicted RBP18.23■□□□□ 0.51
USP39-203ENST00000409470 CCDC92Q53HC0 331 aaPredicted RBP18.22■□□□□ 0.51
USP39-203ENST00000409470 SLC25A25Q6KCM7 469 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 BIVMQ86UB2 503 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 OR52N4Q8NGI2 321 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 OR4D6Q8NGJ1 314 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 FBXO17Q96EF6 278 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 ALKBH3Q96Q83 286 aaPredicted RBP18.22■□□□□ 0.51
USP39-203ENST00000409470 GAL3ST1Q99999 423 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 SOX7Q9BT81 388 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 BEX2Q9BXY8 128 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 SLC6A15Q9H2J7 730 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 MYEF2Q9P2K5 600 aaKnown RBP18.22■□□□□ 0.51
USP39-203ENST00000409470 POU2F3Q9UKI9 436 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 EP300Q09472 2414 aaPredicted RBP18.22■□□□□ 0.51
USP39-203ENST00000409470 CIB4A0PJX0 185 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 ANKRD20A5PA0PJZ0 165 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 ABOP16442 354 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 MEOX1P50221 254 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 LHX2P50458 406 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 HIST1H3AP68431 136 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 CD83Q01151 205 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 ZFP69Q49AA0 526 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 HIST2H3PS2Q5TEC6 136 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 HIST2H3AQ71DI3 136 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 DOK3Q7L591 496 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 TMEM251Q8N6I4 163 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 CNTD2Q9H8S5 307 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 NEK6Q9HC98 313 aa18.22■□□□□ 0.51
USP39-203ENST00000409470 RANGRFQ9HD47 186 aaPredicted RBP18.22■□□□□ 0.51
USP39-203ENST00000409470 NAP1L6A6NFF2 107 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 CDRT15L2A8MXV6 281 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 PRR33A8MZF0 331 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 RBBP9O75884 186 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 ANOS1P23352 680 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 KCNJ8Q15842 424 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 SFRP4Q6FHJ7 346 aaPredicted RBP18.21■□□□□ 0.51
USP39-203ENST00000409470 NAA40Q86UY6 237 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 SLC22A24Q8N4F4 322 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 CPT1CQ8TCG5 803 aa18.21■□□□□ 0.51
USP39-203ENST00000409470 KLRC4-KLRK1H3BQV0 150 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 NME2P1O60361 137 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 ERCC1P07992 297 aaPredicted RBP18.2■□□□□ 0.5
USP39-203ENST00000409470 NME2P22392 152 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 CAPZA1P52907 286 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 UTS2BQ765I0 119 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 ZNF627Q7L945 461 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 LYPD6Q86Y78 171 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 MDS2Q8NDY4 140 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 AKAP1Q92667 903 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP39-203ENST00000409470 TMEM38BQ9NVV0 291 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 A0A0A6YYJ9 748 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 GMDSO60547 372 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 H2AFB2P0C5Z0 115 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 GABRA1P14867 456 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 CD46P15529 392 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 CCL1P22362 96 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 CLDN18P56856 261 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 RRAS2P62070 204 aaPredicted RBP18.2■□□□□ 0.5
USP39-203ENST00000409470 OR10K2Q6IF99 312 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 DNM1P46Q6ZS02 220 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 BTN2A1Q7KYR7 527 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.2■□□□□ 0.5
USP39-203ENST00000409470 VASH2Q86V25 355 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 MEIOBQ8N635 442 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 SPTSSAQ969W0 71 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 METTL17Q9H7H0 456 aaPredicted RBP18.2■□□□□ 0.5
USP39-203ENST00000409470 MCUBQ9NWR8 336 aa18.2■□□□□ 0.5
USP39-203ENST00000409470 APOC1P02654 83 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 PRSS3P35030 304 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 RRADP55042 308 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 TCF15Q12870 199 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 ZNF529Q6P280 563 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 PGAP1Q75T13 922 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 FYTTD1Q96QD9 318 aaKnown RBP18.19■□□□□ 0.5
USP39-203ENST00000409470 UQCC2Q9BRT2 126 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 RHBDD3Q9Y3P4 386 aa18.19■□□□□ 0.5
USP39-203ENST00000409470 E9PLN8 166 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 H7C417 338 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 M0R135 149 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 LDLRAD4O15165 306 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms