RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RFKQ969G6 155 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 UBE2FQ969M7 185 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 DCLRE1BQ9H816 532 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 SMPD3Q9NY59 655 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 NKIRAS2Q9NYR9 191 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 GMPPBQ9Y5P6 360 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 TMEM14AQ9Y6G1 99 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 H2BFMP0C1H6 154 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 HSD11B1P28845 292 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 TMED1Q13445 227 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 GK2Q14410 553 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 GALNT4Q8N4A0 578 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 PACRGLQ8N7B6 248 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 ZNF283Q8N7M2 679 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 GTF3AQ92664 365 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 ADGRL4Q9HBW9 690 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 FAM118AQ9NWS6 357 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 DNAJC27Q9NZQ0 273 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 ZANQ9Y493 2812 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 CSPG4Q6UVK1 2322 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 LOC100130705A0A1B0GUX0 176 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 ZSCAN5BA6NJL1 495 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 H7C1Q1 480 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 DLGAP1O14490 977 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 SLC16A6O15403 523 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 ADH4P08319 380 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 PEX2P28328 305 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 CX3CR1P49238 355 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 PDLIM4P50479 330 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 POU4F2Q12837 409 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 SNAI3Q3KNW1 292 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 LPCAT4Q643R3 524 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 KCTD18Q6PI47 426 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 LURAP1LQ8IV03 231 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 C10orf105Q8TEF2 133 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 UBASH3BQ8TF42 649 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 ASB17Q8WXJ9 295 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 C18orf12Q96KH6 178 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 COX4I2Q96KJ9 171 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 MNTQ99583 582 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 SP140LQ9H930 580 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 ZDHHC8Q9ULC8 765 aa16.92■□□□□ 0.3
PDLIM2-207ENST00000409417 TLN2Q9Y4G6 2542 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 IGHV4-30-2A0A087WSY4 118 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 LOC390937A0A1W2PQ73 354 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 NDUFS8O00217 210 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 CASQ2O14958 399 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 NCR1O76036 304 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 HPXP02790 462 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 SBK2P0C263 348 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 SLC2A1P11166 492 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 MAGEB1P43366 347 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 CCL8P80075 99 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 MRPS11P82912 194 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 ROM1Q03395 351 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 FAM209AQ5JX71 171 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 MEDAGQ5VYS4 303 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 OR2T2Q6IF00 324 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 DEGS2Q6QHC5 323 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 CIARTQ8N365 385 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 ZNF786Q8N393 782 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 DIRC2Q96SL1 478 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 REG4Q9BYZ8 158 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 NIPAL2Q9H841 368 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 MSL2Q9HCI7 577 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 CLN6Q9NWW5 311 aa16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDLIM2-207ENST00000409417 SPRY3O43610 288 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 MPZL2O60487 215 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 IGHV1-46P01743 117 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 SELEP16581 610 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 ANOS1P23352 680 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 CDK5R2Q13319 367 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 OCLNQ16625 522 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 OGFRL1Q5TC84 451 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 LRRN1Q6UXK5 716 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 PGAP1Q75T13 922 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 PRSS45Q7RTY3 260 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 SLC35F2Q8IXU6 374 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 OR52H1Q8NGJ2 320 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 OR51G2Q8NGK0 314 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 REPIN1Q9BWE0 567 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 MROQ9BYG7 248 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 COPS3Q9UNS2 423 aa16.9■□□□□ 0.3
PDLIM2-207ENST00000409417 C5orf63A6NC05 138 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 IQCF6A8MYZ5 107 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 RNF223E7ERA6 249 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 ENTPD6O75354 484 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 ANXA2P07355 339 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 INHBBP09529 407 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 SLC25A16P16260 332 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 GABRB1P18505 474 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF121P58317 390 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF92Q03936 586 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 CARTPTQ16568 116 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 USP51Q70EK9 711 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 MRPL21Q7Z2W9 205 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 KRT77Q7Z794 578 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF555Q8NEP9 628 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms