RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 OGG1O15527 345 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 DUX1O43812 170 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 LY86O95711 162 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 HMGA1P17096 107 aaKnown RBP16.02■□□□□ 0.16
SMPD4-202ENST00000409031 GRB2P62993 217 aaKnown RBP16.02■□□□□ 0.16
SMPD4-202ENST00000409031 ERV3-1Q14264 604 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 SMAD2Q15796 467 aaKnown RBP16.02■□□□□ 0.16
SMPD4-202ENST00000409031 ULBP2Q9BZM5 246 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 IGLV3-16A0A075B6K0 115 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 hCG_1809904A0A1W2PP81 198 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 A0A1W2PR64 198 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 A0A1W2PRV1 198 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 LRP5LA4QPB2 252 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 MFNGO00587 321 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 ARPC3O15145 178 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 PKIAP61925 76 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 NTHL1P78549 312 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 VAMP3Q15836 100 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 LAIR1Q6GTX8 287 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 ATOH1Q92858 354 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-202ENST00000409031 ZFP64Q9NPA5 681 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 CUTCQ9NTM9 273 aa16.02■□□□□ 0.16
SMPD4-202ENST00000409031 GLI4P10075 376 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 CD96P40200 585 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 THBS3P49746 956 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 RBP2P50120 134 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 ACKR1Q16570 336 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 SIGLECL1Q8N7X8 197 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 OR52N5Q8NH56 324 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 RTN4IP1Q8WWV3 396 aaPredicted RBP16.02■□□□□ 0.15
SMPD4-202ENST00000409031 ISOC2Q96AB3 205 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 GHRLQ9UBU3 117 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 MRPS17Q9Y2R5 130 aaKnown RBP16.02■□□□□ 0.15
SMPD4-202ENST00000409031 CDC14CA4D256 554 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 SFT2D2O95562 160 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 CRHP06850 196 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 OR5H8P0DN80 308 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 ABOP16442 354 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 PCBD1P61457 104 aa16.02■□□□□ 0.15
SMPD4-202ENST00000409031 ELAVL1Q15717 326 aaKnown RBP16.02■□□□□ 0.15
SMPD4-202ENST00000409031 PUSL1Q8N0Z8 303 aaKnown RBP16.02■□□□□ 0.15
SMPD4-202ENST00000409031 RPUSD4Q96CM3 377 aaKnown RBP16.02■□□□□ 0.15
SMPD4-202ENST00000409031 SCN7AQ01118 1682 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 XRCC2O43543 280 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ZFP36L2P47974 494 aaKnown RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 GSK3AP49840 483 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 SUMO1P63165 101 aaKnown RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 PLGLB1Q02325 96 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 TMEM52BQ4KMG9 183 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ZNF684Q5T5D7 378 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 PLXDC1Q8IUK5 500 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 FAM181AQ8N9Y4 354 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 R3HDMLQ9H3Y0 253 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 EIF4E2O60573 245 aaKnown RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 RAB32Q13637 225 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 NUBPLQ8TB37 319 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 C11orf49Q9H6J7 331 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 MRPL22Q9NWU5 206 aaKnown RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 KCNE3Q9Y6H6 103 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 G3V3Q6 166 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ELLP55199 621 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 IKZF1Q13422 519 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 NHLRC3Q5JS37 347 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 BTNL8Q6UX41 500 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ZNF383Q8NA42 475 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 OR11H4Q8NGC9 324 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 PIGTQ969N2 578 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 OR8B4Q96RC9 309 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 KCNIP2Q9NS61 270 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 HCFC1R1Q9NWW0 138 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 APOA2P02652 100 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ARG1P05089 322 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 CST2P09228 141 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 SLC25A1P53007 311 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 MORN4Q8NDC4 146 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ALS2Q96Q42 1657 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 SDHCQ99643 169 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 ALX4Q9H161 411 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-202ENST00000409031 CA10Q9NS85 328 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 TOGARAM1Q9Y4F4 1720 aa16.01■□□□□ 0.15
SMPD4-202ENST00000409031 MARCH5Q9NX47 278 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
SMPD4-202ENST00000409031 MPTX1A8MV57 137 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 DPTQ07507 201 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 TMEM268Q5VZI3 342 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 H1FNTQ75WM6 255 aaPredicted RBP16■□□□□ 0.15
SMPD4-202ENST00000409031 SMIM15Q7Z3B0 74 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 THNSL2Q86YJ6 484 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 FER1L6Q2WGJ9 1857 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 A0A0A6YYD5 115 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16■□□□□ 0.15
SMPD4-202ENST00000409031 KIR2DS1A0A191URI9 304 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 ARGFXA6NJG6 315 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 ANKRD30BLA7E2S9 258 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 KIR2DS4P43632 304 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 RPL29P47914 159 aaKnown RBP16■□□□□ 0.15
SMPD4-202ENST00000409031 PIGPP57054 158 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 KIR2DS1Q14954 304 aa16■□□□□ 0.15
SMPD4-202ENST00000409031 ZNF660Q6AZW8 331 aaPredicted RBP16■□□□□ 0.15
SMPD4-202ENST00000409031 NTNG2Q96CW9 530 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms