RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 SLAMF6Q96DU3 332 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A21Q9BQT8 299 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 PBOV1Q9GZY1 135 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 FGF21Q9NSA1 209 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 CACNA1EQ15878 2313 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 SMAD9O15198 467 aaKnown RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 TRAF3IP2O43734 574 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 RAD51DO75771 328 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 OR6A2O95222 327 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 GLB1P16278 677 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 CD96P40200 585 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 RHBDD2Q6NTF9 364 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 BPIFB2Q8N4F0 458 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 C12orf45Q8N5I9 185 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 ZNF75AQ96N20 296 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 ZC4H2Q9NQZ6 224 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 ASPMQ8IZT6 3477 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 BET1O15155 118 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 OR2T1O43869 369 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 IGLV3-1P01715 115 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 UBCP0CG48 685 aaKnown RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A4P12235 298 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 GNB3P16520 340 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 HSD11B1P28845 292 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ATP1B3P54709 279 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 FAM74A1Q5RGS3 127 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 FAM69BQ5VUD6 431 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 C5orf46Q6UWT4 87 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TMPPEQ6ZT21 453 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 HDDC2Q7Z4H3 204 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 HSD17B13Q7Z5P4 300 aaPredicted RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 NKAIN3Q8N8D7 197 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ZBTB44Q8NCP5 570 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TMEM104Q8NE00 496 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ST8SIA4Q92187 359 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 NTNG2Q96CW9 530 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 RASL12Q9NYN1 266 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 UBE2QL1A1L167 161 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 OR5H14A6NHG9 310 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ZNF736B4DX44 427 aaPredicted RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 SULT2B1O00204 365 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 EIF1AYO14602 144 aaKnown RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 SPDEFO95238 335 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 NAGAP17050 411 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 APOBEC1P41238 236 aaKnown RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 BIDP55957 195 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 MYBPHQ13203 477 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ZNF345Q14585 488 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 HLA-DQA1Q5Y7H0 255 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 C3orf33Q6P1S2 294 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 MOB3CQ70IA8 216 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 CD163Q86VB7 1156 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 JAGN1Q8N5M9 183 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 NUBPLQ8TB37 319 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TNFAIP8L1Q8WVP5 186 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ST8SIA2Q92186 375 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TMEM230Q96A57 120 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 C5orf34Q96MH7 638 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 FAM117AQ9C073 453 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 LPAR5Q9H1C0 372 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 IGKV1-9A0A0C4DH69 117 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 A0A1W2PP11 408 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 A6NIZ1 184 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 CDAP32320 146 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 CASRP41180 1078 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 RAP1BP61224 184 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 RAP1AP62834 184 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 NKPD1Q17RQ9 610 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TRAPPC6BQ86SZ2 158 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 MISPQ8IVT2 679 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 BHLHE23Q8NDY6 225 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 MITD1Q8WV92 249 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 FAM46BQ96A09 425 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 DPYSL5Q9BPU6 564 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 SLCO5A1Q9H2Y9 848 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 TTYH1Q9H313 450 aaPredicted RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
MSH2-202ENST00000406134 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
MSH2-202ENST00000406134 C9orf170A2RU37 121 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 VSTM2BA6NLU5 285 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 H3BML4 177 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 EFSO43281 561 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 DUX1O43812 170 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 HRH1P35367 487 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 DAP3P51398 398 aaKnown RBP8.71□□□□□ -1.01
MSH2-202ENST00000406134 TMEM50BP56557 158 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 C11orf87Q6NUJ2 197 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 PLXDC1Q8IUK5 500 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 OR1M1Q8NGA1 313 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 DNASE2BQ8WZ79 361 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 SPACA5Q96QH8 159 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 POTEKPQ9BYX7 375 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms