RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF675Q8TD23 568 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR5P2Q8WZ92 322 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 GTF2H4Q92759 462 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 LRRC58Q96CX6 371 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 RCN3Q96D15 328 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZBED6CLQ96FA7 236 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF681Q96N22 645 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 SH3GL1Q99961 368 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MAPKAP1Q9BPZ7 522 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PELOQ9BRX2 385 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 GID8Q9NWU2 228 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF282Q9UDV7 671 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 BTNL2Q9UIR0 455 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 NXT1Q9UKK6 140 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 FZR1Q9UM11 496 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRPF19Q9UMS4 504 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MMACHCQ9Y4U1 282 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 FKBP7Q9Y680 259 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 WDFY3Q8IZQ1 3526 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MPDZO75970 2070 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CPAMD8Q8IZJ3 1885 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 IGHV3OR16-12A0A075B7B8 117 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF860A6NHJ4 632 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 VSTM2BA6NLU5 285 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SGK494L7N484 410 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 FXYD1O00168 92 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 RFXANKO14593 260 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 AIM2O14862 343 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NVLO15381 856 aaKnown RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 GYG2O15488 501 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 KLK3P07288 261 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 FREM3P0C091 2139 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC35E2P0CK97 266 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCL4P13236 92 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CPMP14384 443 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CD1EP15812 388 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CSNK2A2P19784 350 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CD82P27701 267 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NTSP30990 170 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 XCR1P46094 333 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NUDT2P50583 147 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NOVA1P51513 510 aaKnown RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 XKP51811 444 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 HBA1P69905 142 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SERTAD2Q14140 314 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NKAIN1Q4KMZ8 207 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRSS41Q7RTY9 318 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 DHDDSQ86SQ9 333 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 RANBP3LQ86VV4 465 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 ST13P4Q8IZP2 240 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CENPSQ8N2Z9 138 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 LRRC25Q8N386 305 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRIML2Q8N7C3 387 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 RNF148Q8N7C7 305 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR8J3Q8NGG0 315 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR5T3Q8NGG3 340 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR56B1Q8NGI3 324 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CDC26Q8NHZ8 85 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SFXN5Q8TD22 340 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 DLX4Q92988 240 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF578Q96N58 590 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 PANX1Q96RD7 426 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CGREF1Q99674 301 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 NPAS2Q99743 824 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CTRCQ99895 268 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC7A5P2Q9GIP4 190 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 GLIPR2Q9H4G4 154 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 WDR54Q9H977 334 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 APMAPQ9HDC9 416 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRTFDC1Q9NRG1 225 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 C14orf105Q9NVL8 296 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC39A1Q9NY26 324 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 GPR83Q9NYM4 423 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 TAS2R9Q9NYW1 312 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 ABCD2Q9UBJ2 740 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 DHCR7Q9UBM7 475 aaKnown RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRODH2Q9UF12 536 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 PURGQ9UJV8 347 aaKnown RBP3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF780BQ9Y6R6 833 aa3.78□□□□□ -1.8
HMGB3P19-201ENST00000403971 CFAP54Q96N23 3096 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 IGKV3D-11A0A0A0MRZ8 115 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NPIPA5A0A0B4J1W7 369 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 SPAARA0A1B0GVQ0 90 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 A0A1W2PNU3 283 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 A0A1W2PQ72 361 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ERICH4A6NGS2 130 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 WASHC1A8K0Z3 465 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 EVPLLA8MZ36 301 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 C9J4A7 227 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 C9JVG2 144 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NPIPA5E9PKD4 350 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 IMPA2O14732 288 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 EMC8O43402 210 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 DNAJB6O75190 326 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms