RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 COLCA1Q6ZS62 124 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 PRSS45Q7RTY3 260 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 NANOGP1Q8N7R0 232 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 GATAD2BQ8WXI9 593 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 RORBQ92753 470 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 FAM206AQ9NX38 181 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 TMEM129A0AVI4 362 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 C5orf63A6NC05 138 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 SRSF10O75494 262 aaKnown RBP28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 MT-ND5P03915 603 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 RAD52P43351 418 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 RGS6P49758 472 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 SNAI3Q3KNW1 292 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 FAM57BQ71RH2 274 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 OR52N1Q8NH53 320 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 RNF166Q96A37 237 aaPredicted RBP28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 APOBEC3DQ96AK3 386 aaPredicted RBP28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 GTF2A1LQ9UNN4 478 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 STARD10Q9Y365 291 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 R4GMQ9 66 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 CELSR2Q9HCU4 2923 aa28.7■■■□□ 2.18
CSNK1E-204ENST00000403904 MMP16P51512 607 aa28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 ERVS71-1P61550 626 aa28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 NKX6-1P78426 367 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 VHLLQ6RSH7 139 aa28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF704Q6ZNC4 412 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 OR1J1Q8NGS3 322 aa28.69■■■□□ 2.18
CSNK1E-204ENST00000403904 A0A1W2PPR1 153 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 FAM221AA4D161 298 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 TRIM64A6NGJ6 449 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 GPRIN2O60269 458 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 LCKP06239 509 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF485Q8NCK3 441 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 LILRB1Q8NHL6 650 aaPredicted RBP28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 PPP1R14AQ96A00 147 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 MND1Q9BWT6 205 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 BCL2L14Q9BZR8 327 aa28.68■■■□□ 2.18
CSNK1E-204ENST00000403904 E9PI62 339 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 LOC110117498-PIK3R3F6TDL0 507 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 CTAG2O75638 210 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 GOSR1O95249 250 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 MAP2K4P45985 399 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 SPATA46Q5T0L3 261 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 EGFL6Q8IUX8 553 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF295-AS1Q8N0V1 137 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 NUP37Q8NFH4 326 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 NR1H4Q96RI1 486 aaPredicted RBP28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 POFUT1Q9H488 388 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF319Q9P2F9 582 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 TBX1O43435 398 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 WNT4P56705 351 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 PPP1CBP62140 327 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 UNQ6126/PRO20091Q6UXV3 157 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 KLBQ86Z14 1044 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 PGAM5Q96HS1 289 aa28.67■■■□□ 2.18
CSNK1E-204ENST00000403904 CENPEQ02224 2701 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 GBX2P52951 348 aaPredicted RBP28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 DOC2BQ14184 412 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 PBOV1Q9GZY1 135 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 G6PC2Q9NQR9 355 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 CA10Q9NS85 328 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 BABAM2Q9NXR7 383 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 SNX5Q9Y5X3 404 aa28.66■■■□□ 2.18
CSNK1E-204ENST00000403904 E7EQL1 145 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 MRPS14O60783 128 aaKnown RBP28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 THBS4P35443 961 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 GLRXP35754 106 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 GTF2A1P52655 376 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF672Q499Z4 452 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 XAF1Q6GPH4 301 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF773Q6PK81 442 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 SPARTQ8N0X7 666 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 OR8B12Q8NGG6 310 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 SLC25A40Q8TBP6 338 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 OR5M11Q96RB7 305 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 OR2J1Q9GZK6 312 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 SP140LQ9H930 580 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 OR52A1Q9UKL2 312 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 SLC22A13Q9Y226 551 aa28.65■■■□□ 2.18
CSNK1E-204ENST00000403904 J3QW42 95 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 LALBAP00709 142 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 NANOS3P60323 173 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 CATSPERDQ86XM0 798 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 PRSS35Q8N3Z0 413 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 OR52H1Q8NGJ2 320 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 OR2AE1Q8NHA4 323 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 TMEM171Q8WVE6 324 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 AKAP1Q92667 903 aaKnown RBP eCLIP28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 ZNF696Q9H7X3 374 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 CISD1Q9NZ45 108 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 PTTG3PQ9NZH4 202 aa28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 LSM2Q9Y333 95 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-204ENST00000403904 EMX1Q04741 257 aaPredicted RBP28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 MED22Q15528 200 aa28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 BCL2L15Q5TBC7 163 aa28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 OR5L1Q8NGL2 311 aa28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 OR2G2Q8NGZ5 317 aa28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 NUFIP1Q9UHK0 495 aaKnown RBP28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 FZR1Q9UM11 496 aa28.63■■■□□ 2.17
CSNK1E-204ENST00000403904 ACOD1A6NK06 481 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms