RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 AASSQ9UDR5 926 aa11.74□□□□□ -0.53
VPREB1-202ENST00000403807 PCDHGB1Q9Y5G3 927 aa11.74□□□□□ -0.53
VPREB1-202ENST00000403807 N6AMT1Q9Y5N5 214 aa11.74□□□□□ -0.53
VPREB1-202ENST00000403807 CSMD2Q7Z408 3487 aa11.74□□□□□ -0.53
VPREB1-202ENST00000403807 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ZNF254O75437 659 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ATP6V1G2O95670 118 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ALDH3B1P43353 468 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 CXCR4P61073 352 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 PSG7Q13046 419 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ALKBH6Q3KRA9 238 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 LRRN1Q6UXK5 716 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 NEU4Q8WWR8 484 aaPredicted RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 RNFT2Q96EX2 444 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 CYSLTR2Q9NS75 346 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 IKZF2Q9UKS7 526 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 KLHDC2Q9Y2U9 406 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 RRP15Q9Y3B9 282 aaKnown RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 HSPE1-MOB4S4R3N1 261 aa11.73□□□□□ -0.53
VPREB1-202ENST00000403807 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
VPREB1-202ENST00000403807 TBX1O43435 398 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 TIMM8AO60220 97 aaPredicted RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 NDUFS7O75251 213 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 CLIC3O95833 236 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 IGHV4-39P01824 125 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 SLC2A1P11166 492 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 NAT2P11245 290 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 SELEP16581 610 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 KITLGP21583 273 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 DCTDP32321 178 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 EFNA4P52798 201 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 ROM1Q03395 351 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 EGR3Q06889 387 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 HLXQ14774 488 aaPredicted RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 MAD2L1BPQ15013 274 aaPredicted RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 TESK1Q15569 626 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 USP51Q70EK9 711 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 C8orf59Q8N0T1 100 aaPredicted RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 OR10H4Q8NGA5 316 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 OR52H1Q8NGJ2 320 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 TBX5Q99593 518 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 CGGBP1Q9UFW8 167 aaPredicted RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 PURGQ9UJV8 347 aaKnown RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
VPREB1-202ENST00000403807 LRP12Q9Y561 859 aa11.72□□□□□ -0.53
VPREB1-202ENST00000403807 ACOD1A6NK06 481 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 C17orf100A8MU93 164 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 PSMD9O00233 223 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 XRCC2O43543 280 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 SSX4O60224 188 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 APOL3O95236 402 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 RIDAP52758 137 aaKnown RBP11.71□□□□□ -0.53
VPREB1-202ENST00000403807 ZNF121P58317 390 aaPredicted RBP11.71□□□□□ -0.53
VPREB1-202ENST00000403807 ISL1P61371 349 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 GK2Q14410 553 aaPredicted RBP11.71□□□□□ -0.53
VPREB1-202ENST00000403807 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 ZMAT1Q5H9K5 638 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 Q5PR19 223 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 FAM57BQ71RH2 274 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 APH1BQ8WW43 257 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 TFAP2CQ92754 450 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 PGAM5Q96HS1 289 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 SORCS2Q96PQ0 1159 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
VPREB1-202ENST00000403807 OR10A2Q9H208 303 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 TPK1Q9H3S4 243 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 AMBNQ9NP70 447 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 BRD7Q9NPI1 651 aa11.71□□□□□ -0.53
VPREB1-202ENST00000403807 CREBBPQ92793 2442 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 A0A1W2PQL4 384 aaPredicted RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 DAPL1A0PJW8 107 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 WBP4O75554 376 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 FADS2O95864 444 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 KRT8P05787 483 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 DBTP11182 482 aaKnown RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF81P51508 661 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 MMP15P51511 669 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 AQP4P55087 323 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 DSCR9P59020 149 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ACTC1P68032 377 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ACTA1P68133 377 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF91Q05481 1191 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 RAB40BQ12829 278 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 TIGD6Q17RP2 521 aa11.7□□□□□ -0.54
VPREB1-202ENST00000403807 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
VPREB1-202ENST00000403807 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms