RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 EIF1AXP47813 144 aaKnown RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 TMEM244Q5VVB8 128 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 TCEAL6Q6IPX3 200 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 TRAPPC6BQ86SZ2 158 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 CD163Q86VB7 1156 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 TCEAL3Q969E4 200 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 MARC2Q969Z3 335 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 PURGQ9UJV8 347 aaKnown RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF318Q5VUA4 2279 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 FREM3P0C091 2139 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 LIPCP11150 499 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 MYF5P13349 255 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 PPM1FP49593 454 aaPredicted RBP17.68■□□□□ 0.42
CCDC47-202ENST00000403162 PRKXP51817 358 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 FLI1Q01543 452 aaPredicted RBP17.68■□□□□ 0.42
CCDC47-202ENST00000403162 EBPQ15125 230 aaKnown RBP17.68■□□□□ 0.42
CCDC47-202ENST00000403162 BEX5Q5H9J7 111 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 THAP6Q8TBB0 222 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 TSLPQ969D9 159 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 TBL1XR1Q9BZK7 514 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 PLEKHA6Q9Y2H5 1048 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
CCDC47-202ENST00000403162 TO15178 435 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 MPZL1O95297 269 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 SLC26A5P58743 744 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 IL13RA1P78552 427 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 ATXN7L3Q14CW9 347 aaPredicted RBP17.67■□□□□ 0.42
CCDC47-202ENST00000403162 INPP5JQ15735 1006 aaPredicted RBP17.67■□□□□ 0.42
CCDC47-202ENST00000403162 PCK2Q16822 640 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 INO80EQ8NBZ0 244 aaPredicted RBP17.67■□□□□ 0.42
CCDC47-202ENST00000403162 SLC26A10Q8NG04 563 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 ST7LQ8TDW4 575 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 DUSP23Q9BVJ7 150 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 UCK1Q9HA47 277 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 STK17BO94768 372 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 ATG12O94817 140 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 DEGS2Q6QHC5 323 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 FAM46BQ96A09 425 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 LRFN3Q9BTN0 628 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 NRSN2Q9GZP1 204 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 SOHLH2Q9NX45 425 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 PCDHB10Q9UN67 800 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 PRELID3BQ9Y3B1 194 aa17.67■□□□□ 0.42
CCDC47-202ENST00000403162 CDC14CA4D256 554 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 LILRA5A6NI73 299 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 F5H0A9 414 aaPredicted RBP17.66■□□□□ 0.42
CCDC47-202ENST00000403162 LMX1BO60663 402 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF823P16415 610 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 ELAVL1Q15717 326 aaKnown RBP17.66■□□□□ 0.42
CCDC47-202ENST00000403162 CCDC157Q569K6 752 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF813Q6ZN06 617 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 GRINAQ7Z429 371 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 DCXRQ7Z4W1 244 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 C9orf40Q8IXQ3 194 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 PAQR4Q8N4S7 273 aaPredicted RBP17.66■□□□□ 0.42
CCDC47-202ENST00000403162 STOML3Q8TAV4 291 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 NARS2Q96I59 477 aaKnown RBP17.66■□□□□ 0.42
CCDC47-202ENST00000403162 CNTD2Q9H8S5 307 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 PCDH15Q96QU1 1955 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 TMEM269A0A1B0GVZ9 245 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 A6NIZ1 184 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 FGF16O43320 207 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 AHSA1O95433 338 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 H2AFB1P0C5Y9 115 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 HSD11B1P28845 292 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 BDKRB2P30411 391 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 NR0B1P51843 470 aaKnown RBP17.66■□□□□ 0.42
CCDC47-202ENST00000403162 RAP1BP61224 184 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 RAP1AP62834 184 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 PLCXD2Q0VAA5 305 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 C5orf46Q6UWT4 87 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 OR1S2Q8NGQ3 325 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 NKD1Q969G9 470 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 PDE7BQ9NP56 450 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 MBD2Q9UBB5 411 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 KCNK7Q9Y2U2 307 aa17.66■□□□□ 0.42
CCDC47-202ENST00000403162 PCNX3Q9H6A9 2034 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 IGHV5-51A0A0C4DH38 117 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 SIGLEC6O43699 453 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 OR2T1O43869 369 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 SCGNO76038 276 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 DUS4LO95620 317 aaKnown RBP17.65■□□□□ 0.42
CCDC47-202ENST00000403162 TBPP20226 339 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 QRFPP83859 136 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 UNC119Q13432 240 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 HLA-DQA1Q5Y7H0 255 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 DNM1P34Q6PK57 102 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 GVQW1Q8N7I0 195 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 GPR119Q8TDV5 335 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 CHRNA10Q9GZZ6 450 aa17.65■□□□□ 0.42
CCDC47-202ENST00000403162 DBX1A6NMT0 343 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 OR2AT4A6NND4 320 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 FAM25EA8MYX2 175 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 F8VVB4 439 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 F8VWA3 439 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 EFSO43281 561 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 BPNT1O95861 308 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 GLB1P16278 677 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms