RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MLF1P58340 268 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 RAC3P60763 192 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 HAVCR1Q96D42 359 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.4
SCAF4-202ENST00000399804 ZNF416Q9BWM5 594 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 KLHDC2Q9Y2U9 406 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 OR14I1A6ND48 311 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 SC5DO75845 299 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
SCAF4-202ENST00000399804 DLX5P56178 289 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 IL13RA1P78552 427 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 OR4K15Q8NH41 348 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 LOXL4Q96JB6 756 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 FOXB1Q99853 325 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 LIFP15018 202 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 GALNT11Q8NCW6 608 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 ABHD1Q96SE0 405 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.41
SCAF4-202ENST00000399804 CMSS1Q9BQ75 279 aaKnown RBP12.52□□□□□ -0.41
SCAF4-202ENST00000399804 NELFAQ9H3P2 528 aa12.52□□□□□ -0.41
SCAF4-202ENST00000399804 METTL17Q9H7H0 456 aaPredicted RBP12.52□□□□□ -0.41
SCAF4-202ENST00000399804 TMEM82A0PJX8 343 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 NANOS3P60323 173 aaKnown RBP12.51□□□□□ -0.41
SCAF4-202ENST00000399804 JMJD6Q6NYC1 403 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF585AQ6P3V2 769 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 OR6F1Q8NGZ6 308 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 SNAPC3Q92966 411 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 C21orf140B9A014 251 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ARPC5O15511 151 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 DIRAS3O95661 229 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 CHRM2P08172 466 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 CPT2P23786 658 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 IFITM2Q01629 132 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 CLN3Q13286 438 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 BATF2Q8N1L9 274 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ZSCAN4Q8NAM6 433 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF471Q9BX82 626 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-202ENST00000399804 C1QTNF6Q9BXI9 259 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 EHFQ9NZC4 300 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF44P15621 663 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 FAHP16930 419 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 DCTDP32321 178 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 DCAF10Q5QP82 559 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 FAM198BQ6UWH4 519 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-202ENST00000399804 SMIM4Q8WVI0 70 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ELMOD3Q96FG2 381 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 PHB2Q99623 299 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 OR5V1Q9UGF6 321 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
SCAF4-202ENST00000399804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.5□□□□□ -0.41
SCAF4-202ENST00000399804 CYC1P08574 325 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 CNR1P21554 472 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 GCH1P30793 250 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 UQCRC1P31930 480 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 PCOLCEQ15113 449 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 PCK2Q16822 640 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 LCN10Q6JVE6 187 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 TMPRSS7Q7RTY8 843 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 C20orf85Q9H1P6 137 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
SCAF4-202ENST00000399804 ALDOBP05062 364 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 MEOX1P50221 254 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 SEC61A1P61619 476 aaKnown RBP12.5□□□□□ -0.41
SCAF4-202ENST00000399804 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 EXOSC6Q5RKV6 272 aaKnown RBP12.5□□□□□ -0.41
SCAF4-202ENST00000399804 OR51A4Q8NGJ6 313 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 KCNJ15Q99712 375 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 SLCO5A1Q9H2Y9 848 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 TRGV5A0A0B4J1U4 118 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 FABP7O15540 132 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 TXNDC12O95881 172 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 EFNA3P52797 238 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 BCL2A1Q16548 175 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF426Q9BUY5 554 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 SLC5A7Q9GZV3 580 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF224Q9NZL3 707 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 V9GYH0 126 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
SCAF4-202ENST00000399804 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 F5H5P2 479 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 SELENOPP49908 381 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms