RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ADAM5Q6NVV9 412 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 LYG2Q86SG7 212 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GLCCI1Q86VQ1 547 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC37A3Q8NCC5 494 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR4Q3Q8NH05 313 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MRGPRDQ8TDS7 321 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 NR4A3Q92570 626 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CNRIP1Q96F85 164 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC38A2Q96QD8 506 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 NEURL2Q9BR09 285 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 COL25A1Q9BXS0 654 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 POLR2J3Q9H1A7 115 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GPN2Q9H9Y4 310 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TIGARQ9NQ88 270 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PRDM7Q9NQW5 492 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 INPP5EQ9NRR6 644 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MAT2BQ9NZL9 334 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ICAM5Q9UMF0 924 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ANGPT4Q9Y264 503 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 WDR45Q9Y484 360 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CACNA1EQ15878 2313 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ABCA7Q8IZY2 2146 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMEM200CA6NKL6 621 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CCNKO75909 580 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 APOC1P02654 83 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CXCR2P25025 360 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 XCR1P46094 333 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SSBP2P81877 361 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CHRNEQ04844 493 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ILF3Q12906 894 aaKnown RBP eCLIP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DGUOKQ16854 277 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 EIF2S3LQ2VIR3 472 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PXDC1Q5TGL8 231 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DHRS4L2Q6PKH6 230 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TEPPQ6URK8 271 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 WFDC8Q8IUA0 241 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RHOXF1Q8NHV9 184 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ASB10Q8WXI3 467 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MARC2Q969Z3 335 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAM46AQ96IP4 442 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GUCD1Q96NT3 240 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR6C1Q96RD1 312 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DCLRE1CQ96SD1 692 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 AIF1LQ9BQI0 150 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MS4A8Q9BY19 250 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TCEAL2Q9H3H9 227 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PIGUQ9H490 435 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZFP64Q9NPA5 681 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 FBXO8Q9NRD0 319 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PSG11Q9UQ72 335 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ENPP4Q9Y6X5 453 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MDC1Q14676 2089 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 DOCK8Q8NF50 2099 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 GPR179Q6PRD1 2367 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FRYQ5TBA9 3013 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 NKX6-3A6NJ46 265 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 HCRTR1O43613 425 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 SULT1C4O75897 302 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FGF19O95750 216 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 PPIFP30405 207 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIR2DL2P43627 348 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 XKP51811 444 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 RAB25P57735 213 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 SSX1Q16384 188 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 GLYR1Q49A26 553 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 TYW3Q6IPR3 259 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 PRSS48Q7RTY5 328 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR2L5Q8NG80 312 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR4K5Q8NGD3 323 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 CA5BP1Q8WTZ4 195 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 GEMIN6Q8WXD5 167 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAM210BQ96KR6 192 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 NEDD4LQ96PU5 975 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 MGLLQ99685 303 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ACTRT3Q9BYD9 372 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 PCBD2Q9H0N5 130 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 DPAGT1Q9H3H5 408 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 SFXN1Q9H9B4 322 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 AKIP1Q9NQ31 210 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMED7Q9Y3B3 224 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 VCYO14598 125 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FCN3O75636 299 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 UGT2B17O75795 530 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 AIFM1O95831 613 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 EPPINO95925 133 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDK1P06493 297 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 DBHP09172 617 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 TIMP3P35625 211 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIR2DL3P43628 341 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 CRISP1P54107 249 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 RAP2BP61225 183 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FUT5Q11128 374 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 RUNX3Q13761 415 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 GINS1Q14691 196 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIR3DS1Q14943 382 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 EIF4HQ15056 248 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 PDGFRLQ15198 375 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF791Q3KP31 576 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF658BQ4V348 819 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 PDSS1Q5T2R2 415 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms