RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FAM71E1Q6IPT2 247 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 ANGPTL8Q6UXH0 198 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 LINC00336Q6ZUF6 198 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 SLC16A13Q7RTY0 426 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 MRPL21Q7Z2W9 205 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 MRPL55Q7Z7F7 128 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 HORMAD1Q86X24 394 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 PRSS58Q8IYP2 241 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 CMTM8Q8IZV2 173 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 INO80EQ8NBZ0 244 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 OR5AR1Q8NGP9 310 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 OR6N1Q8NGY5 312 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 OR51F2Q8NH61 342 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 OR10G6Q8NH81 332 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 C17orf50Q8WW18 174 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 TOP1MTQ969P6 601 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 PTX4Q96A99 478 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 PDXPQ96GD0 296 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 ZNF317Q96PQ6 595 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 CSPG4P5Q96PW8 444 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 AGMATQ9BSE5 352 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 NDFIP1Q9BT67 221 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 ANP32EQ9BTT0 268 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 BLZF1Q9H2G9 400 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 PIGUQ9H490 435 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 ZNF430Q9H8G1 570 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 BEX1Q9HBH7 125 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 MRM3Q9HC36 420 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 PXMP2Q9NR77 195 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 TUBG2Q9NRH3 451 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 NECAP2Q9NVZ3 263 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 SLC17A7Q9P2U7 560 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 ZNF222Q9UK12 451 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 YARS2Q9Y2Z4 477 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 RHBDD3Q9Y3P4 386 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 CHTOPQ9Y3Y2 248 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 YTHDF2Q9Y5A9 579 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 TSSC4Q9Y5U2 329 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 COMMD3-BMI1R4GMX3 469 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 NEURL4Q96JN8 1562 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TNS2Q63HR2 1409 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 IGKV2D-24A0A075B6R9 120 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TRAV6A0A075B6T7 132 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TMEM223A0PJW6 202 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 LRCOL1A6NCL2 159 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 ANKRD65E5RJM6 399 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 H7C1H1 209 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TAAR5O14804 337 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 SIVA1O15304 175 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 MED6O75586 246 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 REM1O75628 298 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 APCSP02743 223 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 CD74P04233 296 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 CRYGCP07315 174 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 POLR2MP0CAP2 368 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 PRKACAP17612 351 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 CPN2P22792 545 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 DTYMKP23919 212 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 IL32P24001 234 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 HTR1DP28221 377 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 PEX19P40855 299 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 GPR1P46091 355 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 OR1G1P47890 313 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 RPS23P62266 143 aaKnown RBP1.61□□□□□ -2.15
CD47-203ENST00000398258 DNAJC3Q13217 504 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 ART3Q13508 389 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 STK11Q15831 433 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 C5orf64Q2M2E5 130 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TCEAL5Q5H9L2 206 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 RWDD4Q6NW29 188 aaKnown RBP1.61□□□□□ -2.15
CD47-203ENST00000398258 PRMT9Q6P2P2 845 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 IGFL3Q6UXB1 125 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 LINC00523Q86TU6 105 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 H1FOOQ8IZA3 346 aaPredicted RBP1.61□□□□□ -2.15
CD47-203ENST00000398258 VKORC1L1Q8N0U8 176 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 CBR4Q8N4T8 237 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 ARRDC1Q8N5I2 433 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 FAM184AQ8NB25 1140 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 PROKR2Q8NFJ6 384 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 OR11H7Q8NGC8 314 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 OR8U1Q8NH10 309 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 COQ8AQ8NI60 647 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 OR51E1Q8TCB6 317 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TCEAL3Q969E4 200 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 SGTBQ96EQ0 304 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TIMM17AQ99595 171 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 BCL7BQ9BQE9 202 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 TOLLIPQ9H0E2 274 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 OR52D1Q9H346 318 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 RGCCQ9H4X1 137 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 ZNF442Q9H7R0 627 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 PATZ1Q9HBE1 687 aaKnown RBP1.61□□□□□ -2.15
CD47-203ENST00000398258 RPRD1BQ9NQG5 326 aaKnown RBP1.61□□□□□ -2.15
CD47-203ENST00000398258 TREX1Q9NSU2 369 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 SLC39A1Q9NY26 324 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 HYOU1Q9Y4L1 999 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 RFNGQ9Y644 331 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 PCDH11XQ9BZA7 1347 aa1.61□□□□□ -2.15
CD47-203ENST00000398258 KIF27Q86VH2 1401 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 IGLV4-60A0A075B6I1 120 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms