RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CGGBP1Q9UFW8 167 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ATXN7L1Q9ULK2 861 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM14AQ9Y6G1 99 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 GON4LQ3T8J9 2241 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SCDO00767 359 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 CLDN4O14493 209 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 TNFRSF10CO14798 259 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 ALOX12BO75342 701 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 AMY2AP04746 511 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 CSN2P05814 226 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 PGAM2P15259 253 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 AKR1C3P42330 323 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 RAB4BP61018 213 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 CHAF1BQ13112 559 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 RHOUQ7L0Q8 258 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 PRR22Q8IZ63 422 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 OR13H1Q8NG92 308 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 NUBPLQ8TB37 319 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 LIPHQ8WWY8 451 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 MEGF10Q96KG7 1140 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 LURAP1Q96LR2 239 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 MICU1Q9BPX6 476 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SELENOIQ9C0D9 397 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 UBQLN4Q9NRR5 601 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 FARSAQ9Y285 508 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 KPTNQ9Y664 436 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 PIAS3Q9Y6X2 628 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 NUP210LQ5VU65 1888 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 HOXB5P09067 269 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SPARCP09486 303 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 HOXA5P20719 270 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 LTBRP36941 435 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 TAS2R19P59542 299 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 ACTBP60709 375 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 ACTG1P63261 375 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 FUT7Q11130 342 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC17A1Q14916 467 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 NR0B2Q15466 257 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SCGB2B2Q4G0G5 96 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 FNDC7Q5VTL7 733 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM92Q6UXU6 159 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 MDGA2Q7Z553 956 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 TAF8Q7Z7C8 310 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 C19orf47Q8N9M1 422 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SEH1LQ96EE3 360 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 SULT4A1Q9BR01 284 aa14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 CHMP1AQ9HD42 196 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-201ENST00000397901 A0A1W2PPH5 198 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF264O43296 627 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 IFNA10P01566 189 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 DRD1P21728 446 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 S100A2P29034 98 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 MRPS21P82921 87 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 MFGE8Q08431 387 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF239Q16600 458 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 EMC4Q5J8M3 183 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 ATPAF1Q5TC12 328 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC25A36Q96CQ1 311 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 SMIM8Q96KF7 97 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 OR8B4Q96RC9 309 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 TAS2R4Q9NYW5 299 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 DHDHQ9UQ10 334 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 XKRYO14609 159 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 UTS2O95399 124 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 TNFP01375 233 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 IFNA17P01571 189 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 HLA-AP01891 365 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 CLPSP04118 112 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF28P17035 718 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 HHEXQ03014 270 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 GLYATL3Q5SZD4 288 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 DHRS11Q6UWP2 260 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC22A18ASQ8N1D0 253 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 MMABQ96EY8 250 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 CYTL1Q9NRR1 136 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 POMT1Q9Y6A1 747 aa14.3□□□□□ -0.12
CHMP1A-201ENST00000397901 TDRD6O60522 2096 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 A0A0B4J2A0 478 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 hCG_1809904A0A1W2PP81 198 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 A0A1W2PR64 198 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 A0A1W2PRV1 198 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 DCDC2BA2VCK2 349 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 FAM221BA6H8Z2 402 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 FBXO24O75426 580 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 NME1P15531 152 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 SQSTM1Q13501 440 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 LBHQ53QV2 105 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM225Q6GV28 225 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 MARS2Q96GW9 593 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 ADOQ96SZ5 270 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 RTN4RQ9BZR6 473 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 NXF5Q9H1B4 397 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 PRDM13Q9H4Q3 707 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 SHPKQ9UHJ6 478 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 WIF1Q9Y5W5 379 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 LRP4O75096 1905 aa14.29□□□□□ -0.12
CHMP1A-201ENST00000397901 LOC100509620A0A075B734 347 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms