RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LINC01560Q8TB33 94 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 RAB2BQ8WUD1 216 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 NANOS1Q8WY41 292 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 C12orf43Q96C57 262 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 TMED9Q9BVK6 235 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 NIPAL2Q9H841 368 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ENPP5Q9UJA9 477 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GTF2A1LQ9UNN4 478 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 LOC100506127A0A0U1RQW1 187 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 H3BMQ9 156 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 OGG1O15527 345 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 PLPP2O43688 288 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 AIREO43918 545 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 DOK2O60496 412 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 LYZL6O75951 148 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GOSR1O95249 250 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 PATE4P0C8F1 98 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CD79AP11912 226 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CD53P19397 219 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GADD45AP24522 165 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ARR3P36575 388 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GDI2P50395 445 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 HIST1H3AP68431 136 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ECH1Q13011 328 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 RAB35Q15286 201 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 HIST2H3PS2Q5TEC6 136 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 DMKNQ6E0U4 476 aaPredicted RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 HIST2H3AQ71DI3 136 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 OR10S1Q8NGN2 331 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 TMEM203Q969S6 136 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 SMIM19Q96E16 107 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ATF6BQ99941 703 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 HDHD2Q9H0R4 259 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 PNRC2Q9NPJ4 139 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 DDX28Q9NUL7 540 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 BEX4Q9NWD9 120 aaPredicted RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 PTTG2Q9NZH5 202 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 JKAMPQ9P055 326 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 SIRT4Q9Y6E7 314 aaPredicted RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 TMEM269A0A1B0GVZ9 245 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 RAD51DO75771 328 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 UBL3O95164 117 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 HLA-HP01893 362 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 HEXAP06865 529 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 NR4A1P22736 598 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 DCTDP32321 178 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 UBE2NP61088 152 aaKnown RBP11.52□□□□□ -0.57
SEC13-209ENST00000397117 SORDQ00796 357 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 PSG4Q00888 419 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 ALKBH1Q13686 389 aaKnown RBP11.52□□□□□ -0.57
SEC13-209ENST00000397117 TRAM1Q15629 374 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 ZNF774Q6NX45 483 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 PRIMA1Q86XR5 153 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 CCDC36Q8IYA8 594 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 GABRG1Q8N1C3 465 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 ZNF433Q8N7K0 673 aaPredicted RBP11.52□□□□□ -0.57
SEC13-209ENST00000397117 OR2G2Q8NGZ5 317 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 HSD17B8Q92506 261 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 BCL2L2Q92843 193 aaPredicted RBP11.52□□□□□ -0.57
SEC13-209ENST00000397117 GHSRQ92847 366 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 SPTSSAQ969W0 71 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 BCL7BQ9BQE9 202 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 CHCHD6Q9BRQ6 235 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 OR51E2Q9H255 320 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 EXOSC4Q9NPD3 245 aaKnown RBP11.52□□□□□ -0.57
SEC13-209ENST00000397117 FBXL3Q9UKT7 428 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 STUB1Q9UNE7 303 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 SSR3Q9UNL2 185 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 R4GMQ9 66 aa11.52□□□□□ -0.57
SEC13-209ENST00000397117 A0A1W2PPR1 153 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 EEF1E1-BLOC1S5C9J1V9 151 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 LOC110117498-PIK3R3F6TDL0 507 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 MSTNO14793 375 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 EEF1E1O43324 174 aaKnown RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 GABARAPO95166 117 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 LY6G6DO95868 133 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 APOC1P02654 83 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 HLA-DPB1P04440 258 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 CD1AP06126 327 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 MMP7P09237 267 aaPredicted RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 COX5AP20674 150 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 HTR5AP47898 357 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 NANOS3P60323 173 aaKnown RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 LSM3P62310 102 aaKnown RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 RPS25P62851 125 aaKnown RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 GALK2Q01415 458 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 LSAMPQ13449 338 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 TBRG1Q3YBR2 411 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 SHEQ5VZ18 495 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 FDX2Q6P4F2 183 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 LUZP2Q86TE4 346 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 MS4A15Q8N5U1 240 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms