RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PIPP12273 146 aaPredicted RBP11.75□□□□□ -0.53
SEC13-205ENST00000397101 DCKP27707 260 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 SERPINF1P36955 418 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 DVL1P1P54792 670 aaPredicted RBP11.75□□□□□ -0.53
SEC13-205ENST00000397101 CDH15P55291 814 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 PCBD1P61457 104 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 LSM6P62312 80 aaKnown RBP11.75□□□□□ -0.53
SEC13-205ENST00000397101 ACTC1P68032 377 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 ACTA1P68133 377 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 PIGFQ07326 219 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 SLC18B1Q6NT16 456 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 DPY19L4Q7Z388 723 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 TIGD4Q8IY51 512 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 OR2T27Q8NH04 317 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 TTTY10Q9BZA0 68 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 PLK3Q9H4B4 646 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 OBP2BQ9NPH6 170 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 MRPS18AQ9NVS2 196 aaKnown RBP11.75□□□□□ -0.53
SEC13-205ENST00000397101 KCNG2Q9UJ96 466 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 EXOSC1Q9Y3B2 195 aaKnown RBP11.75□□□□□ -0.53
SEC13-205ENST00000397101 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
SEC13-205ENST00000397101 MAGEA13PA6NCF6 341 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 ATP6V1G2-DDX39BF2Z307 99 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 PHYHO14832 338 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 VENTXO95231 258 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 CDK1P06493 297 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 LYNP07948 512 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 CST2P09228 141 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 SLC15A1P46059 708 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 IDH3GP51553 393 aaPredicted RBP11.74□□□□□ -0.53
SEC13-205ENST00000397101 TAF13Q15543 124 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 SLC36A2Q495M3 483 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 HIKESHIQ53FT3 197 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 FAM27BQ5VT28 67 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 TMEM53Q6P2H8 277 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 USP43Q70EL4 1123 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 SPATC1Q76KD6 591 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 DCXRQ7Z4W1 244 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 SKA3Q8IX90 412 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 ACBD7Q8N6N7 88 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 SNX33Q8WV41 574 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 NEU4Q8WWR8 484 aaPredicted RBP11.74□□□□□ -0.53
SEC13-205ENST00000397101 NABP1Q96AH0 204 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
SEC13-205ENST00000397101 MNTQ99583 582 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 C1QTNF6Q9BXI9 259 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 FGF20Q9NP95 211 aaPredicted RBP11.74□□□□□ -0.53
SEC13-205ENST00000397101 CA10Q9NS85 328 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 CENPMQ9NSP4 180 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 ASH2LQ9UBL3 628 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 IKZF2Q9UKS7 526 aa11.74□□□□□ -0.53
SEC13-205ENST00000397101 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
SEC13-205ENST00000397101 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 FAM157AC9JC47 383 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 MYL12BO14950 172 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 MT-ND2P03891 347 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 PATE4P0C8F1 98 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 SLC35A2P78381 396 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 SCRN3Q0VDG4 424 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 AQP6Q13520 282 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 CARTPTQ16568 116 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 C3orf36Q3SXR2 165 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 NRN1LQ496H8 165 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 KCTD18Q6PI47 426 aaPredicted RBP11.73□□□□□ -0.53
SEC13-205ENST00000397101 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.73□□□□□ -0.53
SEC13-205ENST00000397101 CMYA5Q8N3K9 4069 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 SVOPQ8N4V2 548 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 C3orf56Q8N813 242 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 GJC3Q8NFK1 279 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 TSPAN14Q8NG11 270 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 OTOSQ8NHW6 89 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 FAM216AQ8WUB2 273 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 SGCDQ92629 289 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
SEC13-205ENST00000397101 VRK1Q99986 396 aaPredicted RBP11.73□□□□□ -0.53
SEC13-205ENST00000397101 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 DUSP21Q9H596 190 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 PAK1IP1Q9NWT1 392 aaPredicted RBP11.73□□□□□ -0.53
SEC13-205ENST00000397101 ERGIC3Q9Y282 383 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
SEC13-205ENST00000397101 A0A087WXM4 84 aa11.72□□□□□ -0.53
SEC13-205ENST00000397101 A0A1W2PQL4 384 aaPredicted RBP11.72□□□□□ -0.53
SEC13-205ENST00000397101 UBL3O95164 117 aa11.72□□□□□ -0.53
SEC13-205ENST00000397101 HLA-HP01893 362 aa11.72□□□□□ -0.53
SEC13-205ENST00000397101 H2BFMP0C1H6 154 aa11.72□□□□□ -0.53
SEC13-205ENST00000397101 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
SEC13-205ENST00000397101 ZNF32P17041 273 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms