RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CELF2-AS1Q8N7Q2 184 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 OR4Q3Q8NH05 313 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
SEC13-204ENST00000397099 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 ZNF799Q96GE5 643 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SLC30A2Q9BRI3 323 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SOX7Q9BT81 388 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 POFUT1Q9H488 388 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 ARMC1Q9NVT9 282 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 TREM2Q9NZC2 230 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 PTTG3PQ9NZH4 202 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 NPTNQ9Y639 398 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 COMMD3-BMI1R4GMX3 469 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 LRRC30A6NM36 301 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 ZNF878C9JN71 531 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 J3QLI3 93 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
SEC13-204ENST00000397099 PRODHO43272 600 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 GLCEO94923 617 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 IGHV2-5P01817 119 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 SRP14P37108 136 aaKnown RBP11.8□□□□□ -0.52
SEC13-204ENST00000397099 MZT1Q08AG7 82 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 TAF13Q15543 124 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 TMEM155Q4W5P6 130 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 OR2T2Q6IF00 324 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 SHQ1Q6PI26 577 aaKnown RBP11.8□□□□□ -0.52
SEC13-204ENST00000397099 Q6ZR03 302 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 MRPL21Q7Z2W9 205 aaKnown RBP11.8□□□□□ -0.52
SEC13-204ENST00000397099 DCXRQ7Z4W1 244 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 KLBQ86Z14 1044 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 C1orf87Q8N0U7 546 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
SEC13-204ENST00000397099 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 OR6K6Q8NGW6 343 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 ST7LQ8TDW4 575 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 MAP6Q96JE9 813 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 GAL3ST1Q99999 423 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 COPS4Q9BT78 406 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 PRRG3Q9BZD7 231 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 NARFLQ9H6Q4 476 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 HIF1ANQ9NWT6 349 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 ENOPH1Q9UHY7 261 aa11.8□□□□□ -0.52
SEC13-204ENST00000397099 PPIAL4EA0A075B759 164 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 PPIAL4CA0A0B4J2A2 164 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 PRR23D1E9PI22 279 aaPredicted RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 SPARCP09486 303 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 PRR23D2P0DMB1 279 aaPredicted RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 PPIAL4FP0DN26 164 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 FCGR1AP12314 374 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 CFL1P23528 166 aaKnown RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 SLC6A9P48067 706 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 RAD23AP54725 363 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 GK2Q14410 553 aaPredicted RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 HLXQ14774 488 aaPredicted RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 SNCBQ16143 134 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 ZNF181Q2M3W8 571 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 OTPQ5XKR4 325 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 KLHL36Q8N4N3 616 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 RFLNBQ8N5W9 214 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 SPERTQ8NA61 448 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 SPRYD4Q8WW59 207 aaPredicted RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 SLAMF6Q96DU3 332 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 PLEKHA8Q96JA3 519 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 KCNJ15Q99712 375 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 CADM1Q9BY67 442 aaKnown RBP11.79□□□□□ -0.52
SEC13-204ENST00000397099 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 KIF17Q9P2E2 1029 aa11.79□□□□□ -0.52
SEC13-204ENST00000397099 A0A0G2JMP0 313 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 A0A0X1KG70 313 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 ISPDA4D126 451 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 TVP23AA6NH52 213 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 XRCC2O43543 280 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 GMDSO60547 372 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 FOXH1O75593 365 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 PNPP00491 289 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 POU1F1P28069 291 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 GSTT1P30711 240 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 DDOSTP39656 456 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 GATA4P43694 442 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 BTG1P62324 171 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 CDK5Q00535 292 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 GINS1Q14691 196 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 AVPI1Q5T686 147 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 LIPNQ5VXI9 398 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 PLPP7Q8NBV4 271 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 OR4M2Q8NGB6 313 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 ITFG2Q969R8 447 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 MEGF10Q96KG7 1140 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms