RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TMEM196Q5HYL7 178 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 LCN15Q6UWW0 184 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 PAQR9Q6ZVX9 377 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 C1orf210Q8IVY1 113 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 TMEM102Q8N9M5 508 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 C16orf52Q8NHV5 167 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 BCL2L2Q92843 193 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 SPACA5Q96QH8 159 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 F2RL2O00254 374 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 ICOSLGO75144 302 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 ATP1B1P05026 303 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 DDOSTP39656 456 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 FAM53BQ14153 422 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 ENDOGQ14249 297 aaKnown RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 PLPP6Q8IY26 295 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 RND1Q92730 232 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 ACTR3CQ9C0K3 210 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 A4GALTQ9NPC4 353 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 SLAMF8Q9P0V8 285 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 CLCF1Q9UBD9 225 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 SPTAN1Q13813 2472 aaKnown RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 M0R1X1 148 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 HPP00738 406 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 OR13G1Q8NGZ3 307 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 OR2T11Q8NH01 316 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 OLIG1Q8TAK6 271 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 KCNG2Q9UJ96 466 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 CDX4O14627 284 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 PMS2P2O95744 297 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 SRMP19623 302 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 RFX2P48378 723 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 RTP5Q14D33 572 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 HES3Q5TGS1 186 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 FAM71E1Q6IPT2 247 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 DGAT2L6Q6ZPD8 337 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 NCCRP1Q6ZVX7 275 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 TMPRSS11FQ6ZWK6 438 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 UBE3DQ7Z6J8 389 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 DND1Q8IYX4 353 aaKnown RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 NPEPL1Q8NDH3 523 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 LFNGQ8NES3 379 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 LILRB1Q8NHL6 650 aaPredicted RBP6.53□□□□□ -1.36
UPF2-203ENST00000397053 AKR7LQ8NHP1 331 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 TAAR6Q96RI8 345 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 FOXB1Q99853 325 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 GAL3ST2Q9H3Q3 398 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 SLCO1C1Q9NYB5 712 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 URGCP-MRPS24S4R325 110 aa6.53□□□□□ -1.36
UPF2-203ENST00000397053 TOX4O94842 621 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 PRF1P14222 555 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 HTN1P15515 57 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 RAB5AP20339 215 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 COX5AP20674 150 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ARRB2P32121 409 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 PAX5Q02548 391 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 B3GNT8Q7Z7M8 397 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 OR2A1Q8NGT9 310 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 UBTD2Q8WUN7 234 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 FGF14Q92915 247 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 GNPNAT1Q96EK6 184 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 DPH3Q96FX2 82 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 TAS2R4Q9NYW5 299 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ST3GAL6Q9Y274 331 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 LOC102723971A0A1B0GUV8 181 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 J3QR89 54 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 PPP1R2P9O14990 202 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 EPHA2P29317 976 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 FAM162BQ5T6X4 162 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 TMEM268Q5VZI3 342 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ZNF788Q6ZQV5 615 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 PGBD5Q8N414 524 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 OR1L4Q8NGR5 311 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 DYNLRB2Q8TF09 96 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 UBTD1Q9HAC8 227 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 MN1Q10571 1320 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 A0A1W2PR48 441 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 TNFSF14O43557 240 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 PRKNO60260 465 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 IAPPP10997 89 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 HMGA1P17096 107 aaKnown RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 SDHAP31040 664 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 CNN1P51911 297 aaKnown RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 PRRX1P54821 245 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 UCNP55089 124 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 DSCR4P56555 118 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 DPTQ07507 201 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 COX20Q5RI15 118 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 ZNF691Q5VV52 312 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 DHRS7BQ6IAN0 325 aaPredicted RBP6.52□□□□□ -1.37
UPF2-203ENST00000397053 LYG1Q8N1E2 194 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 OR4F17Q8NGA8 305 aa6.52□□□□□ -1.37
UPF2-203ENST00000397053 OR4F5Q8NH21 305 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms