RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CA13Q8N1Q1 262 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CRLF2Q9HC73 371 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CGGBP1Q9UFW8 167 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CSAG2Q9Y5P2 127 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 XRCC3O43542 346 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 C2orf76Q3KRA6 126 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TMUB2Q71RG4 321 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 RBM45Q8IUH3 476 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 RBPMSQ93062 196 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 MED18Q9BUE0 208 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PRR14Q9BWN1 585 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 NRSN2Q9GZP1 204 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CXCL16Q9H2A7 254 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 MN1Q10571 1320 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR5H15A6NDH6 313 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR5H1A6NKK0 313 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SMLR1H3BR10 107 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TXNL1O43396 289 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 GALR2O43603 387 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FGF17O60258 216 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 EVX1P49640 407 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 RNF4P78317 190 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TOMM34Q15785 309 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 AGBL4Q5VU57 503 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 RSPO2Q6UXX9 243 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR2AK2Q8NG84 335 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR52N5Q8NH56 324 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TSLPQ969D9 159 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SERPINE3A8MV23 424 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DVL1O14640 695 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 GALP22466 123 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PSMB6P28072 239 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DVL1P1P54792 670 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TRA2AQ13595 282 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ACOT6Q3I5F7 207 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PPP1R3CQ9UQK1 317 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 STRAPQ9Y3F4 350 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TNFSF15O95150 251 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 MAGEB1P43366 347 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SMIM21Q3B7S5 101 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR5AS1Q8N127 324 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DEFB123Q8N688 67 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR51E1Q8TCB6 317 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SLC25A32Q9H2D1 315 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF331Q9NQX6 463 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 UPK1AO00322 258 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FUT6P51993 359 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 BPIFB3P59826 476 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ENDOGQ14249 297 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ADIRFQ15847 76 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 AVPI1Q5T686 147 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR5M1Q8NGP8 315 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SLC25A37Q9NYZ2 338 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ATP23Q9Y6H3 246 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR2C1O95371 312 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ALOX5APP20292 161 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SOX18P35713 384 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TGM4P49221 684 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PNLIPRP3Q17RR3 467 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ACSM5Q6NUN0 579 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 CORO6Q6QEF8 472 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ETFBKMTQ8IXQ9 262 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 CELF2-AS1Q8N7Q2 184 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SLC7A6Q92536 515 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PLA2G12AQ9BZM1 189 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ARID1AO14497 2285 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 CASP8AP2Q9UKL3 1982 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TMPRSS11DO60235 418 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 WDR1O75083 606 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DHODHQ02127 395 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 RNPS1Q15287 305 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TIGITQ495A1 244 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FAM162BQ5T6X4 162 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FAM122BQ7Z309 247 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 Q8IYB0 196 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF485Q8NCK3 441 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR52I2Q8NH67 350 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF2Q9BSG1 426 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 TPPP3Q9BW30 176 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FGF20Q9NP95 211 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 HINT3Q9NQE9 182 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FBXO4Q9UKT5 387 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FOXJ3Q9UPW0 622 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 A0A0A6YYD5 115 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FAM166BA8MTA8 275 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF195O14628 629 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR2J2O76002 312 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 NME2P22392 152 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 HAAOP46952 286 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OSR2Q8N2R0 312 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 OR51H1Q8NH63 302 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 RYDENQ9NUL5 291 aaKnown RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ARID2Q68CP9 1835 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF724A8MTY0 619 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 SSSCA1O60232 199 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ITGBL1O95965 494 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-204ENST00000395898 ABCD3P28288 659 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 BMI1P35226 326 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 FCN2Q15485 313 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms