RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 NOS3P29474 1203 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 IFNGR2P38484 337 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
CXCL12-206ENST00000395795 GATA4P43694 442 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF154Q13106 437 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF181Q2M3W8 571 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 SNAI3Q3KNW1 292 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 SLC36A3Q495N2 470 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 LINC01590Q5TEZ4 76 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 PEG10Q86TG7 708 aaKnown RBP13.55□□□□□ -0.24
CXCL12-206ENST00000395795 SPICQ8N5J4 248 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 ATG16L2Q8NAA4 619 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 BHLHE23Q8NDY6 225 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF582Q96NG8 517 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-206ENST00000395795 PITX2Q99697 317 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 NDE1Q9NXR1 346 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 PCDHB10Q9UN67 800 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 INSIG2Q9Y5U4 225 aa13.55□□□□□ -0.24
CXCL12-206ENST00000395795 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 SURF4O15260 269 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 FSTL3O95633 263 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 COMPP49747 757 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-206ENST00000395795 PAX8Q06710 450 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 ECH1Q13011 328 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 CRMP1Q14194 572 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 SLC27A4Q6P1M0 643 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 MOGAT3Q86VF5 341 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 OR51L1Q8NGJ5 315 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 OR9Q1Q8NGQ5 310 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 NSL1Q96IY1 281 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 MAGIXQ9H6Y5 334 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 KCNG2Q9UJ96 466 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
CXCL12-206ENST00000395795 TMEM89A2RUT3 159 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ACOT8O14734 319 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 CCNB2O95067 398 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 PTBP3O95758 552 aaKnown RBP13.53□□□□□ -0.24
CXCL12-206ENST00000395795 CLUP10909 449 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 CD80P33681 288 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF92Q03936 586 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 TRIM25Q14258 630 aaKnown RBP13.53□□□□□ -0.24
CXCL12-206ENST00000395795 RPL13AP3Q6NVV1 102 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 KLHL36Q8N4N3 616 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 AQP11Q8NBQ7 271 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 Q8TCH9 128 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ST7LQ8TDW4 575 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ZNF418Q8TF45 676 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-206ENST00000395795 FAM216AQ8WUB2 273 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 C22orf15Q8WYQ4 148 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 SLCO4A1Q96BD0 722 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 C1orf147Q96MC9 270 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-206ENST00000395795 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 ARMC1Q9NVT9 282 aa13.53□□□□□ -0.24
CXCL12-206ENST00000395795 IFNL4K9M1U5 179 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 M0R135 149 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 SOX14O95416 240 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 HLA-DQA2P01906 255 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 LCATP04180 440 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 GYPBP06028 91 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 CFPP27918 469 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 CD200P41217 278 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 SRP9P49458 86 aaKnown RBP13.52□□□□□ -0.25
CXCL12-206ENST00000395795 SLC25A1P53007 311 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 MPPED2Q15777 294 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 MICAQ29983 383 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ZNF404Q494X3 552 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 OR2T5Q6IEZ7 315 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 CD300LDQ6UXZ3 194 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ZNF841Q6ZN19 808 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 TMEM179BQ7Z7N9 219 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ARHGAP24Q8N264 748 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 LINC00471Q8N535 108 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 TEX29Q8N6K0 151 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 OR2AJ1Q8NGZ0 328 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 OR2T4Q8NH00 348 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 OR2T29Q8NH02 315 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 OR2AE1Q8NHA4 323 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ZNF799Q96GE5 643 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 CLPTM1LQ96KA5 538 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ZNF48Q96MX3 618 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-206ENST00000395795 NIPSNAP1Q9BPW8 284 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 TSSK6Q9BXA6 273 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 MUC13Q9H3R2 512 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 TMEM100Q9NV29 134 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 TAS2R1Q9NYW7 299 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 ZNF69Q9UC07 566 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 SOX21Q9Y651 276 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-206ENST00000395795 U3KQV3 271 aa13.52□□□□□ -0.25
CXCL12-206ENST00000395795 CD300LBA8K4G0 201 aa13.51□□□□□ -0.25
CXCL12-206ENST00000395795 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-206ENST00000395795 FCN3O75636 299 aa13.51□□□□□ -0.25
CXCL12-206ENST00000395795 SPI1P17947 270 aa13.51□□□□□ -0.25
CXCL12-206ENST00000395795 MNAT1P51948 309 aa13.51□□□□□ -0.25
CXCL12-206ENST00000395795 MXRA7P84157 204 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms