RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ISPDA4D126 451 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 CEACAM18A8MTB9 384 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 F5H5K5 113 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 J3QW42 95 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 FCN3O75636 299 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 CCNB2O95067 398 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 FAM107AO95990 144 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 CYB5R3P00387 301 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-205ENST00000394892 WNT2P09544 360 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 SPI1P17947 270 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 EPHA1P21709 976 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 SLC6A9P48067 706 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 COMPP49747 757 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-205ENST00000394892 RGS6P49758 472 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 RAD23AP54725 363 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 BTG1P62324 171 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 MXRA7P84157 204 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF92Q03936 586 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 MPPED2Q15777 294 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 MICAQ29983 383 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 OR2T5Q6IEZ7 315 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 PGM2L1Q6PCE3 622 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 DNM1P34Q6PK57 102 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 DHFR2Q86XF0 187 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 HS3ST5Q8IZT8 346 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 OR2T29Q8NH02 315 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 OR2AE1Q8NHA4 323 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ST7LQ8TDW4 575 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 FAM216AQ8WUB2 273 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 SLCO4A1Q96BD0 722 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 RAB39BQ96DA2 213 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 TIMD4Q96H15 378 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 AMELYQ99218 206 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 PITX2Q99697 317 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ATF6BQ99941 703 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 TSSK6Q9BXA6 273 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 MAGIXQ9H6Y5 334 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 PPP1R3EQ9H7J1 279 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 KRCC1Q9NPI7 259 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-205ENST00000394892 DDX28Q9NUL7 540 aaKnown RBP7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF319Q9P2F9 582 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 PPP1R3CQ9UQK1 317 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 COMMD3-BMI1R4GMX3 469 aa7.42□□□□□ -1.22
ATG4A-205ENST00000394892 ARHGAP32A7KAX9 2087 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 A8MXK9 166 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 TNFRSF13BO14836 293 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 LCATP04180 440 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC2A1P11166 492 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 ANPEPP15144 967 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF12P17014 697 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 EGR1P18146 543 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CALB2P22676 271 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CD80P33681 288 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 IFNGR2P38484 337 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC25A1P53007 311 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 TMEM155Q4W5P6 130 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 KLHL12Q53G59 568 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 ZMAT1Q5H9K5 638 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 GLYATL3Q5SZD4 288 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 DCAF12L2Q5VW00 463 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 PRAMEF6Q5VXH4 476 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 LYPD2Q6UXB3 125 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CD300LDQ6UXZ3 194 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 PRSS45Q7RTY3 260 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 MOGAT3Q86VF5 341 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 BCL6BQ8N143 479 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 ZDHHC22Q8N966 263 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CCDC197Q8NCU1 140 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 C19orf18Q8NEA5 215 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 OR13G1Q8NGZ3 307 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CANT1Q8WVQ1 401 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 C22orf15Q8WYQ4 148 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CCDC124Q96CT7 223 aaKnown RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC7A6OSQ96CW6 309 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 C1orf147Q96MC9 270 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 FEVQ99581 238 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SLC6A7Q99884 636 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 TMEM246Q9BRR3 403 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 CHID1Q9BWS9 393 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 C7orf69Q9H7B7 122 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 NDE1Q9NXR1 346 aa7.41□□□□□ -1.22
ATG4A-205ENST00000394892 SAMHD1Q9Y3Z3 626 aaKnown RBP7.41□□□□□ -1.22
ATG4A-205ENST00000394892 PPIAL4EA0A075B759 164 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PPIAL4CA0A0B4J2A2 164 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 A0A0G2JMP0 313 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 A0A0X1KG70 313 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 TMEM89A2RUT3 159 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 FAM183AA6NL82 134 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 CD300LBA8K4G0 201 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PPIAL4DF5H284 164 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 J3QLI3 93 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 M0R135 149 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF593O00488 134 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 FAM20BO75063 409 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms