RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FAHD2BQ6P2I3 314 aaPredicted RBP16.77■□□□□ 0.27
CBX1-202ENST00000393408 SHISA6Q6ZSJ9 500 aa16.77■□□□□ 0.27
CBX1-202ENST00000393408 OR2W3Q7Z3T1 314 aa16.77■□□□□ 0.27
CBX1-202ENST00000393408 PLPP5Q8NEB5 264 aa16.77■□□□□ 0.27
CBX1-202ENST00000393408 FAHD2AQ96GK7 314 aa16.77■□□□□ 0.27
CBX1-202ENST00000393408 PHB2Q99623 299 aa16.77■□□□□ 0.27
CBX1-202ENST00000393408 ZNF471Q9BX82 626 aaPredicted RBP16.77■□□□□ 0.27
CBX1-202ENST00000393408 DUSP15Q9H1R2 295 aaPredicted RBP16.77■□□□□ 0.27
CBX1-202ENST00000393408 ATP6V1G2-DDX39BF2Z307 99 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 SULT2B1O00204 365 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 CNR1P21554 472 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 CLDN6P56747 220 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.27
CBX1-202ENST00000393408 ZNF529Q6P280 563 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 OR10S1Q8NGN2 331 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 AIFM2Q9BRQ8 373 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 IFT46Q9NQC8 304 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 ZC4H2Q9NQZ6 224 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 GNB3P16520 340 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 AVPR2P30518 371 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 CASRP41180 1078 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 EIF1AXP47813 144 aaKnown RBP16.76■□□□□ 0.27
CBX1-202ENST00000393408 GPR85P60893 370 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 C17orf67Q0P5P2 114 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 ELP2Q6IA86 826 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 KLHL24Q6TFL4 600 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 RHOUQ7L0Q8 258 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 DTWD2Q8NBA8 298 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 ADAD2Q8NCV1 583 aaKnown RBP16.76■□□□□ 0.27
CBX1-202ENST00000393408 OR10H5Q8NGA6 315 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 C5orf34Q96MH7 638 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 NUDT16L1Q9BRJ7 211 aaKnown RBP16.76■□□□□ 0.27
CBX1-202ENST00000393408 FN3KRPQ9HA64 309 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 TAS2R3Q9NYW6 316 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 KLHL13Q9P2N7 655 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 FBLN5Q9UBX5 448 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 SLC5A6Q9Y289 635 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 KCNK7Q9Y2U2 307 aa16.76■□□□□ 0.27
CBX1-202ENST00000393408 FAM25EA8MYX2 175 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 EFSO43281 561 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 SSX5O60225 188 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 SCGNO76038 276 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 WDPCPO95876 746 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 GSK3AP49840 483 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 RTN4RL2Q86UN3 420 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 PLXDC1Q8IUK5 500 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 OR13C9Q8NGT0 318 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 EMC6Q9BV81 110 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 GAREM1Q9H706 876 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 VDAC3Q9Y277 283 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 LIPT2A6NK58 231 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 ZNF208O43345 1280 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 GP1BAP07359 652 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 ERCC1P07992 297 aaPredicted RBP16.75■□□□□ 0.27
CBX1-202ENST00000393408 RAB3AP20336 220 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 PRKXP51817 358 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 SUMO3P55854 103 aaPredicted RBP16.75■□□□□ 0.27
CBX1-202ENST00000393408 BIDP55957 195 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 PPIAP62937 165 aaKnown RBP16.75■□□□□ 0.27
CBX1-202ENST00000393408 FOXF1Q12946 379 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 TMEM17Q86X19 198 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 BPIFCQ8NFQ6 507 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 OR5D14Q8NGL3 314 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 OR10R2Q8NGX6 335 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 FBXW5Q969U6 566 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 DDIT4LQ96D03 193 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 SELENOIQ9C0D9 397 aa16.75■□□□□ 0.27
CBX1-202ENST00000393408 ASXL3Q9C0F0 2248 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 TMEM14DPA8MWL7 114 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 DNASE2O00115 360 aaPredicted RBP16.74■□□□□ 0.27
CBX1-202ENST00000393408 SIGLEC5O15389 551 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 TBPP20226 339 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 SIGLEC14Q08ET2 396 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 SNTB1Q13884 538 aaKnown RBP16.74■□□□□ 0.27
CBX1-202ENST00000393408 PAN3Q58A45 887 aaKnown RBP16.74■□□□□ 0.27
CBX1-202ENST00000393408 THAP6Q8TBB0 222 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 CASTOR1Q8WTX7 329 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 PMEPA1Q969W9 287 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 CHRDQ9H2X0 955 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 FANCFQ9NPI8 374 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 SEMA5BQ9P283 1151 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 DUS4LO95620 317 aaKnown RBP16.74■□□□□ 0.27
CBX1-202ENST00000393408 VAMP1P23763 118 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 COX15Q7KZN9 410 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 APCDD1LQ8NCL9 501 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 LRRC46Q96FV0 321 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 MESP1Q9BRJ9 268 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 SERINC1Q9NRX5 453 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 SLC22A11Q9NSA0 550 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 ALKBH4Q9NXW9 302 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 MBD2Q9UBB5 411 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 HRH3Q9Y5N1 445 aa16.74■□□□□ 0.27
CBX1-202ENST00000393408 EYSQ5T1H1 3165 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 CEP290O15078 2479 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 UNC13CQ8NB66 2214 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 DUX1O43812 170 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 FOSL2P15408 326 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 AKR1C4P17516 323 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 NXPH1P58417 271 aa16.73■□□□□ 0.27
CBX1-202ENST00000393408 INPP5JQ15735 1006 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms