RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RAB6AP20340 208 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 SRD5A2P31213 254 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 RBMS2Q15434 407 aaKnown RBP22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 YRDCQ86U90 279 aaKnown RBP22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 SLC22A24Q8N4F4 322 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF431Q8TF32 576 aaPredicted RBP22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 MED30Q96HR3 178 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 METTL17Q9H7H0 456 aaPredicted RBP22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 NPDC1Q9NQX5 325 aaPredicted RBP22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 DLL4Q9NR61 685 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 NPTNQ9Y639 398 aa22.61■■□□□ 1.21
SMARCD3-203ENST00000392811 JMJD7P0C870 316 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF20P17024 532 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 MSR1P21757 451 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 SELENOPP49908 381 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF133P52736 654 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 CAPZA1P52907 286 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ACTBP60709 375 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ACTG1P63261 375 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ACER2Q5QJU3 275 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF283Q8N7M2 679 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZIC4Q8N9L1 334 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 OR8S1Q8NH09 359 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 LILRB4Q8NHJ6 448 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 DVL3Q92997 716 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF436Q9C0F3 470 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 GPR84Q9NQS5 396 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 P4HTMQ9NXG6 502 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 GJE1A6NN92 205 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 IL5P05113 134 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ABOP16442 354 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 GUCA1AP43080 201 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 GRB2P62993 217 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 UQCC2Q9BRT2 126 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 GINS4Q9BRT9 223 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 DDA1Q9BW61 102 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 SPRY4Q9C004 299 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 B3GNT4Q9C0J1 378 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 NELFAQ9H3P2 528 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ZMAT3Q9HA38 289 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 SCPEP1Q9HB40 452 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 RYDENQ9NUL5 291 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 ELF5Q9UKW6 265 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 RAB22AQ9UL26 194 aa22.6■■□□□ 1.21
SMARCD3-203ENST00000392811 KIAA1549Q9HCM3 1950 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 SERPINA7P05543 415 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 GALK2Q01415 458 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 ENDOGQ14249 297 aaKnown RBP22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 ANGPT1Q15389 498 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 STEAP1BQ6NZ63 245 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 FOXL2NBQ6ZUU3 175 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 FAM57BQ71RH2 274 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 PAQR4Q8N4S7 273 aaPredicted RBP22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 ACBD4Q8NC06 268 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 OR51S1Q8NGJ8 323 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 OR14L1PQ8NHC6 308 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 GRPEL2Q8TAA5 225 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 NKD1Q969G9 470 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 PTTG3PQ9NZH4 202 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 ZNF69Q9UC07 566 aa22.59■■□□□ 1.21
SMARCD3-203ENST00000392811 C9orf172C9J069 976 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 S100A1P23297 94 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 CSRP2Q16527 193 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 GABRG1Q8N1C3 465 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 BEST3Q8N1M1 668 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 SLC39A7Q92504 469 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 NABP1Q96AH0 204 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 FAM71F1Q96KD3 344 aaPredicted RBP22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 SCP2D1Q9UJQ7 156 aa22.58■■□□□ 1.21
SMARCD3-203ENST00000392811 LRRC3CA6NJW4 275 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 TNFRSF10AO00220 468 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 SMAD9O15198 467 aaKnown RBP22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 RFPL3SP0C7P2 107 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 QRFPP83859 136 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 UNC119Q13432 240 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 ZNF626Q68DY1 528 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 NLRC3Q7RTR2 1065 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 GPN1Q9HCN4 374 aaPredicted RBP22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 FOXD3Q9UJU5 478 aaPredicted RBP22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 NCKAP5O14513 1909 aa22.58■■□□□ 1.2
SMARCD3-203ENST00000392811 DHHO43323 396 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 BPNT1O95861 308 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 VSIG10L2P0DP72 767 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 CD59P13987 128 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 CCL1P22362 96 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 RBM24Q9BX46 236 aaKnown RBP22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 SLC5A6Q9Y289 635 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 METTL21EPA6NDL7 271 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 WIPF3A6NGB9 483 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 SNRPGP15A8MWD9 76 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 CREBL2O60519 120 aaPredicted RBP22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 ERCC1P07992 297 aaPredicted RBP22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 CTSSP25774 331 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 SUCLG1P53597 346 aaKnown RBP22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 TAS2R19P59542 299 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 GFOD2Q3B7J2 385 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 SLC36A1Q7Z2H8 476 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 RNF144BQ7Z419 303 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 MEIOBQ8N635 442 aa22.57■■□□□ 1.2
SMARCD3-203ENST00000392811 TMEM229BQ8NBD8 167 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms