RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 FAM26DQ5JW98 314 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 PRAMEF20Q5VT98 475 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM174Q8WUU8 243 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 FAM210BQ96KR6 192 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 PACRGQ96M98 296 aaPredicted RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 SFXN1Q9H9B4 322 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 CITO14578 2027 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 NDUFB6O95139 128 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 AKR7A3O95154 331 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 ZNF17P17021 662 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 NKG7Q16617 165 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 MANEAQ5SRI9 462 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 CYHR1Q6ZMK1 362 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 OR10P1Q8NGE3 313 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 CYSLTR2Q9NS75 346 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 RNF150Q9ULK6 438 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 SLC22A13Q9Y226 551 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 NOSIPQ9Y314 301 aaKnown RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 GOLT1BQ9Y3E0 138 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM202A6NGA9 273 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 TTRP02766 147 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 HNRNPA1P09651 372 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 HOXD9P28356 352 aaPredicted RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 OR2AE1Q8NHA4 323 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 SEMA6CQ9H3T2 930 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 BET1LQ9NYM9 111 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 MYO5AQ9Y4I1 1855 aaKnown RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 HCRTR1O43613 425 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 DEFA4P12838 97 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 CEBPBP17676 345 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 ETFBKMTQ8IXQ9 262 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 SPINK4O60575 86 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 GALR3O60755 368 aaPredicted RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 ACAA1P09110 424 aaPredicted RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 EDDM3AQ14507 147 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 OR14A16Q8NHC5 309 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 WDFY2Q96P53 400 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 CXCL16Q9H2A7 254 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 YTHDF2Q9Y5A9 579 aaKnown RBP14.69□□□□□ -0.06
SHANK1-204ENST00000391814 ELOA3CA0A087WX78 387 aaPredicted RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 LOC102723971A0A1B0GUV8 181 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 RBP2P50120 134 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 CTBSQ01459 385 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 MLF2Q15773 248 aaPredicted RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 C1orf140Q5VVS0 124 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 HTR3DQ70Z44 454 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 GPR32P1Q8NGA4 272 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SLAMF6Q96DU3 332 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 NMES1Q9C002 83 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 GLSO94925 669 aaPredicted RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SCGB1C2P0DMR2 95 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 FAM162BQ5T6X4 162 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 AAED1Q7RTV5 226 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 FBXO17Q96EF6 278 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SLC22A12Q96S37 553 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 GPR87Q9BY21 358 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 ZDHHC5Q9C0B5 715 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 LOXHD1Q8IVV2 1947 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 PRAMEF25A6NGN4 478 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 ARPC3O15145 178 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 OR2J3O76001 311 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SLCO2B1O94956 709 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 GRPP07492 148 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 PKIAP61925 76 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 TIGITQ495A1 244 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 PRAMEF5Q5TYX0 476 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 PRAMEF6Q5VXH4 476 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 DYRK2Q92630 601 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 CORO2AQ92828 525 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 BADQ92934 168 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 IGF2P01344 180 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 S100A7P31151 101 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 RPS27P42677 84 aaKnown RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 C5orf46Q6UWT4 87 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 DND1Q8IYX4 353 aaKnown RBP14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SIRT5Q9NXA8 310 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 H3BNC9 293 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SULT1A3P0DMM9 295 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SULT1A4P0DMN0 295 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 AGERQ15109 404 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 SSX1Q16384 188 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 HGDQ93099 445 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 STACQ99469 402 aa14.68□□□□□ -0.06
SHANK1-204ENST00000391814 KIAA1324LA8MWY0 1029 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 BMPR1BO00238 502 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 COX5AP20674 150 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 BMPR1AP36894 532 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SPICQ8N5J4 248 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 LCORQ96JN0 433 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SLCO1C1Q9NYB5 712 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 ASPDHA6ND91 283 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SOX15O60248 233 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 DIO1P49895 249 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 AWAT1Q58HT5 328 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 FCRL6Q6DN72 434 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TRILQ7L0X0 811 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SCCPDHQ8NBX0 429 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms