RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 R3HDM4Q96D70 268 aa14.19□□□□□ -0.14
HMGN1-203ENST00000380748 RIMS3Q9UJD0 308 aa14.19□□□□□ -0.14
HMGN1-203ENST00000380748 TRAV27A0A087WT01 109 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 TRAV38-1A0A0B4J264 116 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 A0A1B0GW55 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 OOEPA6NGQ2 149 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 H3BUX3 64 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 OR5F1O95221 314 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 ECDO95905 644 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L2P0CJ85 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L3P0CJ86 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L4P0CJ87 422 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L5P0CJ88 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L6P0CJ89 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L7P0CJ90 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 WDR4P57081 412 aaKnown RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 VSNL1P62760 191 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 POU4F2Q12837 409 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 PIN1Q13526 163 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 ZBTB37Q5TC79 503 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 PATL1Q86TB9 770 aaKnown RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 FAM90A1Q86YD7 464 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 OR2T6Q8NHC8 308 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 SLC26A7Q8TE54 656 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 AENQ8WTP8 325 aaKnown RBP14.18□□□□□ -0.14
HMGN1-203ENST00000380748 HCAR1Q9BXC0 346 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 FN3KRPQ9HA64 309 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 DUX4Q9UBX2 424 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 SH3GLB1Q9Y371 365 aa14.18□□□□□ -0.14
HMGN1-203ENST00000380748 MEIOCA2RUB1 952 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 NDUFA2O43678 99 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 CD28P10747 220 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 IGLL1P15814 213 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 CTLA4P16410 223 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 EEF1B2P24534 225 aaKnown RBP14.17□□□□□ -0.14
HMGN1-203ENST00000380748 SAA4P35542 130 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 MTPNP58546 118 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 GUCA2AQ02747 115 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 FHL1Q13642 323 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 LY6EQ16553 131 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 OR51A7Q8NH64 312 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 BPIFA2Q96DR5 249 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 ATPIF1Q9UII2 106 aa14.17□□□□□ -0.14
HMGN1-203ENST00000380748 TEX13CA0A0J9YWL9 993 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 FBXO24O75426 580 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 IFI30P13284 250 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 ELF3P78545 371 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-203ENST00000380748 GK2Q14410 553 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-203ENST00000380748 OR8G1Q15617 311 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 C11orf91Q3C1V1 193 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 DEFB121Q5J5C9 76 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 LY6G5BQ8NDX9 201 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 ZNF583Q96ND8 569 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 TRIM36Q9NQ86 728 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 ADAM18Q9Y3Q7 739 aa14.16□□□□□ -0.14
HMGN1-203ENST00000380748 DYNC2H1Q8NCM8 4307 aaKnown RBP14.16□□□□□ -0.14
HMGN1-203ENST00000380748 IGHV3OR15-7A0A075B7D8 119 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 ADARB2-AS1A8MUL3 147 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 CA6P23280 308 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 LSM6P62312 80 aaKnown RBP14.15□□□□□ -0.14
HMGN1-203ENST00000380748 EMX1Q04741 257 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-203ENST00000380748 RSPO1Q2MKA7 263 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-203ENST00000380748 MESTQ5EB52 335 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 EPGNQ6UW88 154 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 COLCA1Q6ZS62 124 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 ZNF826PQ6ZT77 177 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 Q8N7P7 452 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 OR4F17Q8NGA8 305 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 C17orf50Q8WW18 174 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 CLPTM1LQ96KA5 538 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 Q96M85 177 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 OR4F4Q96R69 305 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 CENPHQ9H3R5 247 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 RERGLQ9H628 205 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 C1orf123Q9NWV4 160 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 KAAG1Q9UBP8 84 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 MAB21L2Q9Y586 359 aa14.15□□□□□ -0.14
HMGN1-203ENST00000380748 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 PTBP3O95758 552 aaKnown RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 AGKQ53H12 422 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 TNFAIP8L3Q5GJ75 292 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 CMTM4Q8IZR5 234 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 GCSAMQ8N6F7 178 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 BEND2Q8NDZ0 799 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 OR13C2Q8NGS9 318 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 TNFRSF14Q92956 283 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 COQ7Q99807 217 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 SSX3Q99909 188 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 ADAT1Q9BUB4 502 aaKnown RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 POLR2J2Q9GZM3 115 aaKnown RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 POLR2J3Q9H1A7 115 aaKnown RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 RANBP3Q9H6Z4 567 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 COA3Q9Y2R0 106 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-203ENST00000380748 POLR1DQ9Y2S0 133 aa14.14□□□□□ -0.15
HMGN1-203ENST00000380748 PRSS37A4D1T9 235 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 MEGF11A6BM72 1044 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 IMPA2O14732 288 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 SLC16A7O60669 478 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms