RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 COMMD2Q86X83 199 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC7A6Q92536 515 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC25A28Q96A46 364 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 LDAHQ9H6V9 325 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 GPR84Q9NQS5 396 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 PAQR5Q9NXK6 330 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 E9PLN8 166 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 GSTZ1O43708 216 aaPredicted RBP17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 CST2P09228 141 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 FAM157BP0CG42 384 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 B4GALT1P15291 398 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 HTR2CP28335 458 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 PTH2RP49190 550 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 GPR176Q14439 515 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 TMEM69Q5SWH9 247 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 HACD4Q5VWC8 232 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 KRT74Q7RTS7 529 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 TUSC5Q8IXB3 177 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 DUSP18Q8NEJ0 188 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 FOXB1Q99853 325 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 PRRG4Q9BZD6 226 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 KCNK15Q9H427 330 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 FAM240BA0A1B0GVZ2 78 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 C5orf63A6NC05 138 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 DDOSTP39656 456 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 RANBP1P43487 201 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 EFNB2P52799 333 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 TSPO2Q5TGU0 170 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF813Q6ZN06 617 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 JAGN1Q8N5M9 183 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 OR5D14Q8NGL3 314 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 SMIM4Q8WVI0 70 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 EXO5Q9H790 373 aa17.43■□□□□ 0.38
PDLIM5-205ENST00000380180 LOC100289279A0A1B0GTE1 492 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 IGHV3-9P01782 118 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 OTX1P32242 354 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC6A9P48067 706 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 DEFB109BQ30KR1 87 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 PLET1Q6UQ28 207 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 IGFL2Q6UWQ7 119 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 LYPD6Q86Y78 171 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 TOMM5Q8N4H5 51 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 HPS1Q92902 700 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 GCDHQ92947 438 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 PGAM5Q96HS1 289 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 AUNIPQ9H7T9 357 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 CALHM2Q9HA72 323 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 NLKQ9UBE8 527 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 MED12LQ86YW9 2145 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 LOC390937A0A1W2PQ73 354 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 SULT1B1O43704 296 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 KRT33AO76009 404 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 DBHP09172 617 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 ABOP16442 354 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 BDKRB2P30411 391 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 PMP22Q01453 160 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 GFOD2Q3B7J2 385 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC22A24Q8N4F4 322 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 NKAIN3Q8N8D7 197 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 OR1M1Q8NGA1 313 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 FAM71F1Q96KD3 344 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 DOCK7Q96N67 2140 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 SLCO5A1Q9H2Y9 848 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 ZDHHC11Q9H8X9 412 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 RNF121Q9H920 327 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 PARPBPQ9NWS1 579 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 EMC3Q9P0I2 261 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 CACNG2Q9Y698 323 aa17.42■□□□□ 0.38
PDLIM5-205ENST00000380180 TRGV5A0A0B4J1U4 118 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 TMEM272A0A1B0GTI8 110 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF891A8MT65 544 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 SGCEO43556 437 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 CCL1P22362 96 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 C1orf100Q5SVJ3 147 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 ANKRD16Q6P6B7 361 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 OR6M1Q8NGM8 313 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 TMEM138Q9NPI0 162 aa17.41■□□□□ 0.38
PDLIM5-205ENST00000380180 MEIOCA2RUB1 952 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 M0R135 149 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 XRCC3O43542 346 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ORC5O43913 435 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 CTAG2O75638 210 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 PATE4P0C8F1 98 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ARSBP15848 533 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF20P17024 532 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 TAS2R20P59543 309 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 RAB35Q15286 201 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 AGAP6Q5VW22 663 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF529Q6P280 563 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 DOK3Q7L591 496 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 CHMP1BQ7LBR1 199 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 BIVMQ86UB2 503 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 OR52N4Q8NGI2 321 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 OR13C9Q8NGT0 318 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 FOXRED1Q96CU9 486 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 ZNF799Q96GE5 643 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 BCO1Q9HAY6 547 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC17A5Q9NRA2 495 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC7A10Q9NS82 523 aa17.4■□□□□ 0.38
PDLIM5-205ENST00000380180 SPRR3Q9UBC9 169 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms