RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TCRBP04435 133 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 SRD5A2P31213 254 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 TSPAN7P41732 249 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 DGCR2P98153 550 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 RBPJQ06330 500 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 GPR176Q14439 515 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 SHBQ15464 509 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 SSX6Q7RTT6 188 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 OR52I2Q8NH67 350 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 GPR87Q9BY21 358 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 LUZP4Q9P127 313 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNN3Q9UGI6 736 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 HSPB2A8KAH6 182 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 H7C417 338 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 CPT2P23786 658 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 IDH3GP51553 393 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF121P58317 390 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 UBE2MP61081 183 aaKnown RBP12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 IL13RA1P78552 427 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 IFITM2Q01629 132 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 HSPB2Q16082 182 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 EIF5AL1Q6IS14 154 aaKnown RBP12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM181AQ8N9Y4 354 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 SEC22CQ9BRL7 303 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 GPR173Q9NS66 373 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 NLRC5Q86WI3 1866 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 TRGV5A0A0B4J1U4 118 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 K7ESF4 209 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 M0R036 132 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 GOSR2O14653 212 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 RER1O15258 196 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 PEX14O75381 377 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 CALCBP10092 127 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 WDR38Q5JTN6 314 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 STEAP1BQ6NZ63 245 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 COMTD1Q86VU5 262 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 CMTM4Q8IZR5 234 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 IL1F10Q8WWZ1 152 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 INTS12Q96CB8 462 aaKnown RBP12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 TRIB1Q96RU8 372 aa12.71□□□□□ -0.38
SHROOM1-203ENST00000378679 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ARPC4-TTLL3A0A0A6YYG9 625 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 SC5DO75845 299 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 FGF5P12034 268 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 IRF2P14316 349 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ALOX5APP20292 161 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 CDK2P24941 298 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 LIMS1P48059 325 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 MESTQ5EB52 335 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ST6GAL2Q96JF0 529 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 PHB2Q99623 299 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ATPIF1Q9UII2 106 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 LHX6Q9UPM6 363 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 TRAV17A0A0B4J275 112 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 HPP00738 406 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 EIF4EP06730 217 aaKnown RBP12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 FAAP20Q6NZ36 180 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 GSG1LQ6UXU4 331 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 TSEN54Q7Z6J9 526 aaKnown RBP12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR52H1Q8NGJ2 320 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 SRRQ9GZT4 340 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 HAO2Q9NYQ3 351 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 DSPPQ9NZW4 1301 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ANKRD34CP0C6C1 535 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 DLX5P56178 289 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF766Q5HY98 468 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC25A30Q5SVS4 291 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 JMJD6Q6NYC1 403 aaPredicted RBP12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 MRGPREQ86SM8 312 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 ASF1BQ9NVP2 202 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
SHROOM1-203ENST00000378679 LIPT2A6NK58 231 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC22A20A6NK97 555 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 M0QYG6 137 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 HSPB6O14558 160 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 SULT1B1O43704 296 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TSPAN2O60636 221 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF250P15622 560 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 CCR9P51686 369 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 RBMS2Q15434 407 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 C2orf76Q3KRA6 126 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms