RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MRPS24Q96EL2 167 aaKnown RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SMIM7Q9BQ49 75 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 CTSFQ9UBX1 484 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 CGGBP1Q9UFW8 167 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 MEIKINA0A087WXM9 373 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 CLN3Q13286 438 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SHHQ15465 462 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF485Q8NCK3 441 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 GABARAPL1Q9H0R8 117 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 GIPP09681 153 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 PIPP12273 146 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ERVFC1-1P60608 527 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 DTWD2Q8NBA8 298 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 GPR78Q96P69 363 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 TAAR6Q96RI8 345 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 UBQLN3Q9H347 655 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 KCNG2Q9UJ96 466 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 PPP1CBP62140 327 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 TPBGQ13641 420 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 EMCNQ9ULC0 261 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 PMS2P1A4D2B8 440 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 RPUSD3Q6P087 351 aaKnown RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 VWA1Q6PCB0 445 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 OR2M3Q8NG83 312 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 A0A1B0GTW7 788 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 CHRM2P08172 466 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ACHEP22303 614 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 GLRA1P23415 457 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 S100A4P26447 101 aaKnown RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 OR5M1Q8NGP8 315 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 NDRG3Q9UGV2 375 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 MYBPHQ13203 477 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SLC22A12Q96S37 553 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ARHGDIGQ99819 225 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 BCL6P41182 706 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 MEOX1P50221 254 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ATOH8Q96SQ7 321 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 SLC25A32Q9H2D1 315 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 E5RGE8 158 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 TMEM189-UBE2V1I3L0A0 370 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 LIM2P55344 173 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 GPR85P60893 370 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 IHHQ14623 411 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 LAIR1Q6GTX8 287 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 KCNE4Q8WWG9 221 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ASB13Q8WXK3 278 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 MS4A8Q9BY19 250 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 C12orf10Q9HB07 376 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 NSG2Q9Y328 171 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF787Q6DD87 383 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 RETREG3Q86VR2 466 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 FBXO4Q9UKT5 387 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 PROCRQ9UNN8 238 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 TIMM10BQ9Y5J6 103 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 UBE2L5PA0A1B0GUS4 154 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 MLF1P58340 268 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ZDHHC23Q8IYP9 409 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 LILRA2Q8N149 483 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 CELF2-AS1Q8N7Q2 184 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 GJA4P35212 333 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 SLC5A6Q9Y289 635 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 FIGNL2A6NMB9 653 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 APEX1P27695 318 aaKnown RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 TEAD1P28347 426 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 IRS1P35568 1242 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 Q6ZPB1 254 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF534Q76KX8 674 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 WFDC8Q8IUA0 241 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 OR2A1Q8NGT9 310 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 GPX8Q8TED1 209 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 HRH1P35367 487 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF835Q9Y2P0 537 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 WDR1O75083 606 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 NME1P15531 152 aaKnown RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 AKR1C3P42330 323 aa11.38□□□□□ -0.59
VPS13A-204ENST00000376634 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
VPS13A-204ENST00000376634 SIRPB1O00241 398 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 SLCO2B1O94956 709 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 RRASP10301 218 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms