RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 DHRS13Q6UX07 377 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 CCDC190Q86UF4 302 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 TMEM200AQ86VY9 491 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 ZC3HAV1LQ96H79 300 aaKnown RBP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 XRCC2O43543 280 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 IFNA10P01566 189 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 DCTDP32321 178 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF141Q15928 474 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF674Q2M3X9 581 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 WIPI1Q5MNZ9 446 aaPredicted RBP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 CCDC71Q8IV32 467 aaPredicted RBP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 OR8D4Q8NGM9 314 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 TRIB1Q96RU8 372 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 FBXL4Q9UKA2 621 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 A0A1W2PQF6 199 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 SHOXO15266 292 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 SNRNP70P08621 437 aaKnown RBP12.27□□□□□ -0.44
C9orf47-203ENST00000375851 RFX2P48378 723 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 PPT1P50897 306 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 HBG1P69891 147 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 HBG2P69892 147 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 CDC20Q12834 499 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 OR8G1Q15617 311 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 USF2Q15853 346 aaPredicted RBP12.27□□□□□ -0.44
C9orf47-203ENST00000375851 ELFN2Q5R3F8 820 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 WDSUB1Q8N9V3 476 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 REEP6Q96HR9 211 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 LRP12Q9Y561 859 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.44
C9orf47-203ENST00000375851 FMODQ06828 376 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 HNF4GQ14541 408 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 ANKRD37Q7Z713 158 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 NOXO1Q8NFA2 376 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 OR6K3Q8NGY3 331 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 OR51H1Q8NH63 302 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 PTDSS2Q9BVG9 487 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 FAM234AQ9H0X4 552 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 KLK11Q9UBX7 282 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 POLDIP2Q9Y2S7 368 aa12.27□□□□□ -0.44
C9orf47-203ENST00000375851 TRIM64BA6NI03 449 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 SLC17A2O00624 439 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 PRRG2O14669 202 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 SNAPINO95295 136 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 RAD52P43351 418 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 TAS2R30P59541 319 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 SSX1Q16384 188 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 DEFB109BQ30KR1 87 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 DND1Q8IYX4 353 aaKnown RBP12.27□□□□□ -0.45
C9orf47-203ENST00000375851 TMEM217Q8N7C4 229 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 AKR7LQ8NHP1 331 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 RNF141Q8WVD5 230 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF2Q9BSG1 426 aaPredicted RBP12.27□□□□□ -0.45
C9orf47-203ENST00000375851 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 ICE1Q9Y2F5 2266 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 SCN3AQ9NY46 2000 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 FAM221AA4D161 298 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 PMS2P1A4D2B8 440 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 ZFPL1O95159 310 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 RHBDD2Q6NTF9 364 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 PWWP2BQ6NUJ5 590 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 OR10J5Q8NHC4 309 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.45
C9orf47-203ENST00000375851 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PLXNB2O15031 1838 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 SERPINA7P05543 415 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 GNB3P16520 340 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CHATP28329 748 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CRYBB2P43320 205 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PSG6Q00889 435 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 SLC22A25Q6T423 547 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CYSLTR2Q9NS75 346 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 COL11A1P12107 1806 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 GREM1O60565 184 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 FAHP16930 419 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 KITLGP21583 273 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 BCKDHBP21953 392 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 ATPAF1Q5TC12 328 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 UBL7Q96S82 380 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 A0A0A6YYJ9 748 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 FFAR1O14842 300 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PLPP2O43688 288 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms