RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 KRT33AO76009 404 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 ASPHD2Q6ICH7 369 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 SLC16A13Q7RTY0 426 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 AGBL5Q8NDL9 886 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 EDARQ9UNE0 448 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 DHDHQ9UQ10 334 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 A0A1W2PNR3 127 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 SRSF10O75494 262 aaKnown RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSH5-202ENST00000375740 UMODP07911 640 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 CYC1P08574 325 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 ACAA1P09110 424 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 SPP1P10451 314 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 TAS2R20P59543 309 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 TMEM185AQ8NFB2 350 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 OR51D1Q8NGF3 324 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 THRSPQ92748 146 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 AKAP7Q9P0M2 348 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 NXT1Q9UKK6 140 aaKnown RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 EML6Q6ZMW3 1958 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 TMEM272A0A1B0GTI8 110 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 ADCYAP1P18509 176 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 PCK2Q16822 640 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 PRAMEF20Q5VT98 475 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 HAGHLQ6PII5 290 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 RPH3AQ9Y2J0 694 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 CHCHD2Q9Y6H1 151 aaPredicted RBP12.44□□□□□ -0.42
MSH5-202ENST00000375740 R4GMQ9 66 aa12.44□□□□□ -0.42
MSH5-202ENST00000375740 IGHV1-45A0A0A0MS14 117 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 CER1O95813 267 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 ECDO95905 644 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 HAAOP46952 286 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 MUC20Q8N307 709 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 ZNF75AQ96N20 296 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 OR5B2Q96R09 309 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 TSNAXQ99598 290 aaKnown RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 NKX3-1Q99801 234 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 ZNF230Q9UIE0 474 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 A0A1W2PNV4 684 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 KLF7O75840 302 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 AQP8O94778 261 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 NDUFB6O95139 128 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 ITGA5P08648 1049 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 EFNB2P52799 333 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 RIPPLY1Q0D2K3 151 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 TRA2AQ13595 282 aaKnown RBP eCLIP12.43□□□□□ -0.42
MSH5-202ENST00000375740 BEX5Q5H9J7 111 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 TMEM225Q6GV28 225 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 RBMS3Q6XE24 437 aaKnown RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 SLC36A1Q7Z2H8 476 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 OR4K17Q8NGC6 315 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 IMMP1LQ96LU5 166 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 CHST6Q9GZX3 395 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 GPN1Q9HCN4 374 aaPredicted RBP12.43□□□□□ -0.42
MSH5-202ENST00000375740 G6PC2Q9NQR9 355 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 RASL12Q9NYN1 266 aa12.43□□□□□ -0.42
MSH5-202ENST00000375740 KIF26BQ2KJY2 2108 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 PQLC2LA1A4F0 135 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 F5H5P2 479 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 TP53I11O14683 189 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SMAD9O15198 467 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 NDUFS6O75380 124 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 GLSO94925 669 aaPredicted RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 RLN1P04808 185 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 PVALBP20472 110 aaPredicted RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 MNDAP41218 407 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 RBMS2Q15434 407 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 C3orf33Q6P1S2 294 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 FADS6Q8N9I5 356 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 PLPP7Q8NBV4 271 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SFT2D1Q8WV19 159 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
MSH5-202ENST00000375740 BCL2L14Q9BZR8 327 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 SLC25A32Q9H2D1 315 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 KLHL13Q9P2N7 655 aa12.42□□□□□ -0.42
MSH5-202ENST00000375740 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms