RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 HINT2Q9BX68 163 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FAM234AQ9H0X4 552 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FRRS1LQ9P0K9 344 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 MRM2Q9UI43 246 aaKnown RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 GDF2Q9UK05 429 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FAM96BQ9Y3D0 163 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TRPM6Q9BX84 2022 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 IGKV1-8A0A0C4DH67 115 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 IGHV3-64DA0A0J9YX35 117 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OR2J2O76002 312 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TOMM34Q15785 309 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TRILQ7L0X0 811 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SLC30A7Q8NEW0 376 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OR51A4Q8NGJ6 313 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OTOSQ8NHW6 89 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 NANPQ8TBE9 248 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 MRPL38Q96DV4 380 aaKnown RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SLCO5A1Q9H2Y9 848 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SCPEP1Q9HB40 452 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 MMACHCQ9Y4U1 282 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 CKAP5Q14008 2032 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 GBF1Q92538 1859 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ANKRD20A5PA0PJZ0 165 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ZFP92A6NM28 416 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 GPR85P60893 370 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ACSM1Q08AH1 577 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 PPP1R1AQ13522 171 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 PLA1AQ53H76 456 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 C11orf87Q6NUJ2 197 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 DGAT2L6Q6ZPD8 337 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 BHLHE23Q8NDY6 225 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 RGP1Q92546 391 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ABHD6Q9BV23 337 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 SMCO4Q9NRQ5 59 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 RFPL4AA6NLU0 287 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 RFPL4AL1F8VTS6 287 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 SSR4P51571 173 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 DMKNQ6E0U4 476 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 TMPRSS11FQ6ZWK6 438 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 TXNIPQ9H3M7 391 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 FBXO7Q9Y3I1 522 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 TO15178 435 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 TBX19O60806 448 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 PSMB6P28072 239 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 GRB2P62993 217 aaKnown RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 LANCL3Q6ZV70 420 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF784Q8NCA9 323 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 OR2G3Q8NGZ4 309 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 MALSU1Q96EH3 234 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 STRADBQ9C0K7 418 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 C12orf49Q9H741 205 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 RCL1Q9Y2P8 373 aaKnown RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 LOC102725191A0A1B0GVB3 256 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 FTCDNL1E5RQL4 147 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 XRCC2O43543 280 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 LILRB5O75023 590 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 OR2C1O95371 312 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 CD80P33681 288 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 OPRM1P35372 400 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 EFNB2P52799 333 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 OR2B8PP59922 312 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ETFDHQ16134 617 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 RNLSQ5VYX0 342 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 C16orf47Q6ZP98 133 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 Q6ZRG5 221 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 CLRN3Q8NCR9 226 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 OR52N5Q8NH56 324 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 ANKRD9Q96BM1 317 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-202ENST00000375340 REEP6Q96HR9 211 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 NTMQ9P121 344 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 DTX4Q9Y2E6 619 aa5.9□□□□□ -1.47
SMC1A-202ENST00000375340 MSTNO14793 375 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SLC34A2O95436 690 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 GUSBP08236 651 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 CSF2RBP32927 897 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 PDCD1Q15116 288 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 RTL6Q6ICC9 239 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZC3HAV1LQ96H79 300 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 UNKLQ9H9P5 680 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 B3GALT5Q9Y2C3 310 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 VWA8A3KMH1 1905 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF816-ZNF321PA0A0X1KG74 233 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 GSTZ1O43708 216 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 HSD17B7P56937 341 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ARG2P78540 354 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 CDONQ4KMG0 1287 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OR51A2Q8NGJ7 313 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OR1S2Q8NGQ3 325 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 FN3KRPQ9HA64 309 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF629Q9UEG4 869 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SCN10AQ9Y5Y9 1956 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF705FA8MVS1 300 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF705DP0CH99 300 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF705BP0CI00 300 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 DPP4P27487 766 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LIMS1P48059 325 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 FLI1Q01543 452 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 DOK3Q7L591 496 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms