RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 UPK3AO75631 287 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 ZFPL1O95159 310 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 SNAPINO95295 136 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
HMGA1-203ENST00000374116 CPN1P15169 458 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 RAP2BP61225 183 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 EGR3Q06889 387 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 ALKBH1Q13686 389 aaKnown RBP12.68□□□□□ -0.38
HMGA1-203ENST00000374116 PDSS1Q5T2R2 415 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 TOMM5Q8N4H5 51 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 STK35Q8TDR2 534 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 ST8SIA2Q92186 375 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 DERL3Q96Q80 235 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 ABHD1Q96SE0 405 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 TAS2R10Q9NYW0 307 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 KLHDC2Q9Y2U9 406 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF407Q9C0G0 2248 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 A0A1B0GW55 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 H7C1C5 153 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 PSMD9O00233 223 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 CTDSPLO15194 276 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 PIN1P1O15428 100 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ABHD16AO95870 558 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR8G3PP0DMU2 310 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 GIFP27352 417 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MAPK3P27361 379 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MAGEA5P43359 124 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 CENPAP49450 140 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SELENOPP49908 381 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 RPL27P61353 136 aaKnown RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 LCN6P62502 163 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 FOXK1P85037 733 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 TOMM20Q15388 145 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 UBE2NLQ5JXB2 153 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SYT9Q86SS6 491 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF671Q8TAW3 534 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 TMEM234Q8WY98 164 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SLC25A36Q96CQ1 311 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MRPS24Q96EL2 167 aaKnown RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 INTS14Q96SY0 518 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DEFB127Q9H1M4 99 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 METTL17Q9H7H0 456 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 PIPOXQ9P0Z9 390 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 PPP4R1LQ9P1A2 415 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ANKUB1A6NFN9 424 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 TVP23AA6NH52 213 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 HMSDA8MTL9 139 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MCRIP1C9JLW8 97 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR2T1O43869 369 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 AQP8O94778 261 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF432O94892 652 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR2A4O95047 310 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 RPP14O95059 124 aaKnown RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ALOX5APP20292 161 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 MEOX2P50222 304 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SUMO3P55854 103 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 PPIAP62937 165 aaKnown RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 HSF1Q00613 529 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 C17orf67Q0P5P2 114 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 Q499Y3 187 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SIAH3Q8IW03 269 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF843Q8N446 348 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR6N2Q8NGY6 317 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR6S1Q8NH40 331 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR1S1Q8NH92 325 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 RGP1Q92546 391 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-203ENST00000374116 RELTQ969Z4 430 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 ELMOD3Q96FG2 381 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 OR2A7Q96R45 310 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 SLITRK2Q9H156 845 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 TXNIPQ9H3M7 391 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
HMGA1-203ENST00000374116 NBASA2RRP1 2371 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 IGLV3-32A0A0A0MS00 114 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 A6NIN4 97 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms