RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 S1PR5Q9H228 398 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 TRAPPC4Q9Y296 219 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 IFITM5A6NNB3 132 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 CNEP1R1Q8N9A8 125 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 SMIM7Q9BQ49 75 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 OR5H15A6NDH6 313 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 OR5H1A6NKK0 313 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 TMEM127O75204 238 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 FKBP2P26885 142 aaKnown RBP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 CPEB2Q7Z5Q1 589 aaKnown RBP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 NT5CQ8TCD5 201 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 SLC25A43Q8WUT9 341 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 KIR2DS1A0A191URI9 304 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 CD22P20273 847 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 CD27P26842 260 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 IL3RAP26951 378 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 KIR2DS4P43632 304 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 KIR2DS1Q14954 304 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 LPAL2Q16609 132 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 GUK1Q16774 197 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 OR51A2Q8NGJ7 313 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 CXorf58Q96LI9 332 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 SUCNR1Q9BXA5 334 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 FITM1A5D6W6 292 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 HSD17B6O14756 317 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 C1QAP02745 245 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 RPL12P30050 165 aaKnown RBP12.91□□□□□ -0.34
LMX1B-202ENST00000373474 HIST1H3AP68431 136 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 MAP6Q96JE9 813 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 KCNJ15Q99712 375 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 UTP23Q9BRU9 249 aaKnown RBP12.91□□□□□ -0.34
LMX1B-202ENST00000373474 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 SERTM1A2A2V5 107 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 PRTGQ2VWP7 1150 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 STAC2Q6ZMT1 411 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 BANF2Q9H503 90 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 TMEM231Q9H6L2 316 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 U3KQ87 197 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 PLRG1O43660 514 aaKnown RBP12.91□□□□□ -0.34
LMX1B-202ENST00000373474 APEHP13798 732 aaKnown RBP12.91□□□□□ -0.34
LMX1B-202ENST00000373474 RPL18Q07020 188 aaKnown RBP12.91□□□□□ -0.34
LMX1B-202ENST00000373474 Q1RN00 199 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 OR8G2PQ6IF36 304 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 SLAMF6Q96DU3 332 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 A4GNTQ9UNA3 340 aa12.91□□□□□ -0.34
LMX1B-202ENST00000373474 GPR171O14626 319 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 ADH4P08319 380 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.34
LMX1B-202ENST00000373474 EXT1Q16394 746 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 PHLDA2Q53GA4 152 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
LMX1B-202ENST00000373474 FLVCR2Q9UPI3 526 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 A0A0B4J203 849 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 H0Y8X5 98 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 ACKR1Q16570 336 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 ARIH2OSQ8N7S6 290 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 OR5AP2Q8NGF4 316 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF320A2RRD8 509 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 HNF1AP20823 631 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 AGERQ15109 404 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 H2BFWTQ7Z2G1 175 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 OR2AE1Q8NHA4 323 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 SLC35E1Q96K37 410 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 B3GAT1Q9P2W7 334 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 KCNE1BA0A087WTH5 132 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 MPGP29372 298 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 TEX101Q9BY14 249 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 PISDQ9UG56 409 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 PADI1Q9ULC6 663 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
LMX1B-202ENST00000373474 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 G3V3Y1 287 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 PPICP45877 212 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 SSBP1Q04837 148 aaKnown RBP12.9□□□□□ -0.35
LMX1B-202ENST00000373474 CDONQ4KMG0 1287 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 LIMS2Q7Z4I7 341 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 ADGRG3Q86Y34 549 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 OR51E1Q8TCB6 317 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 DOK1Q99704 481 aa12.9□□□□□ -0.35
LMX1B-202ENST00000373474 EVPLQ92817 2033 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 H0YIG0 161 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 M0QZK8 103 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 SPINT2O43291 252 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ICOSLGO75144 302 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 GGCTO75223 188 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms