RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 FAM166AQ6J272 317 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF813Q6ZN06 617 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 ABHD12BQ7Z5M8 362 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-202ENST00000372405 CMTM4Q8IZR5 234 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 Q8N402 240 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 AKR7LQ8NHP1 331 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 APH1AQ96BI3 265 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 LYZL4Q96KX0 146 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 ABHD1Q96SE0 405 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 WNT5BQ9H1J7 359 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF175Q9Y473 711 aa12.07□□□□□ -0.48
PTPRF-202ENST00000372405 SVILO95425 2214 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 OR6C6A6NF89 314 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 M0R135 149 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 AQP7O14520 342 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 TMEM127O75204 238 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 TAB1Q15750 504 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 UBE2NLQ5JXB2 153 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 SFRP5Q5T4F7 317 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 SLC16A14Q7RTX9 510 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 LUZP2Q86TE4 346 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 LYPD6Q86Y78 171 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 MCEMP1Q8IX19 187 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF799Q96GE5 643 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 HDHD2Q9H0R4 259 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 PRSS50Q9UI38 385 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 MSRB2Q9Y3D2 182 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 RHBDD3Q9Y3P4 386 aa12.06□□□□□ -0.48
PTPRF-202ENST00000372405 A0A1B0GVI7 797 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF587BE7ETH6 402 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 CALCBP10092 127 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 EIF2S3P41091 472 aaKnown RBP12.05□□□□□ -0.48
PTPRF-202ENST00000372405 PITPNBP48739 271 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SPOCK1Q08629 439 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SCRN3Q0VDG4 424 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 NRN1LQ496H8 165 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF529Q6P280 563 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 GDPD3Q7L5L3 318 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF627Q7L945 461 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 OR1F12Q8NHA8 337 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 WACQ9BTA9 647 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 C12orf49Q9H741 205 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 FAIMQ9NVQ4 179 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 CKLFQ9UBR5 152 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 STEAP1Q9UHE8 339 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF503-AS2A6NEH8 195 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 OR6C65A6NJZ3 312 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SLC17A2O00624 439 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 PTTG1O95997 202 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 ABOP16442 354 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 TALDO1P37837 337 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 DDOSTP39656 456 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SLC6A9P48067 706 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 STK11Q15831 433 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SNAI3Q3KNW1 292 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 PGAM5Q96HS1 289 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-202ENST00000372405 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 KCNK15Q9H427 330 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 SP140LQ9H930 580 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 CGGBP1Q9UFW8 167 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-202ENST00000372405 TIMM10BQ9Y5J6 103 aa12.05□□□□□ -0.48
PTPRF-202ENST00000372405 A0A096LPE4 126 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 LINC00854A0A1B0GVQ3 168 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 DLL1O00548 723 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 PLA2G10O15496 165 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 LANCL1O43813 399 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 RFX2P48378 723 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 FAPQ12884 760 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 BIVMQ86UB2 503 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 COMMD2Q86X83 199 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 SERPINA12Q8IW75 414 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 OR51D1Q8NGF3 324 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 OR5M9Q8NGP3 310 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 ABCG5Q9H222 651 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
PTPRF-202ENST00000372405 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 TMIGD3P0DMS9 266 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-202ENST00000372405 FCGR2AP12318 317 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 SCN1BQ07699 218 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 FGD2Q7Z6J4 655 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 CPEB3Q8NE35 698 aaKnown RBP12.03□□□□□ -0.48
PTPRF-202ENST00000372405 OR14K1Q8NGZ2 314 aa12.03□□□□□ -0.48
PTPRF-202ENST00000372405 SETD6Q8TBK2 473 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms